KEGG   Solanum lycopersicum (tomato): 101266037
Entry
101266037         CDS       T02665                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101266037
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101266037
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 101266037
NCBI-ProteinID: XP_004241621
UniProt: A0A3Q7H0I1
LinkDB
Position
6:complement(45485318..45494274)
AA seq 695 aa
MATAASKAADSYIGSLICLITKSDIRYEGFLFHLDAAESTIGLRNVKSYGSEGRKKDGPQ
ISPSDKIYEYIFFRGSDIKDLQVISSATPQSTAVVPDDPAIIQTHFPNPTPPTIGMTSPG
AVQVADVSTSAPSMLPVAPFLLNLPPNPLLPSSNLWGSSLPPPPVNISGPAVPNYWPGLV
GSSGGVSHYQQQQQQQRFPPPPQSLVASLPIQQQAQHQNVNALAGGSSLAAQHHPLLLPI
STTSPNLLPAMPSPSGQSNPRQPAKPAFNLLSIPMPNDAFRTLSTVAVDSCPRTVSSLEA
ELNANANLTPVRKEPSSVISPSGSFPTFSQTVSSIVDTKGASLSNLSRQSLLTPEVQSGE
KDSSSSQSMKNPNFDVYTGQASVSEPLPSGSTEETLESLPKSPTKILRGSTSSHHNRSYF
AQRRDGAHQDTSSTHHNSRGPPAHRGNVPNGGPIYAQQSYRKYASGRGNGLIGAALHSRQ
SNMGMGRGKVPNGVPQHNHRSTGIQFRDGVTQHNHRNTGIQFRDGVPQHNHRNTGSHFRG
RGAKNPLVTKRFSEDFDFEAMNEKFNKKEVWDFLGRSNKDEPDEGIGDEKEMGESDAEDT
TGDRSAKHDNKPVYCKEDFFDSLSCHALDRESGKVKFSDQRKKDVETFGEIQKNPWGRSQ
RARMSGGVQQSYRGRGYDNARGGRGQGRTVWGRVT
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggcaacggcggcctctaaggcagccgactcctacattgggagtcttatttgcttgatc
acaaagtctgatatacgctatgaaggattcctatttcatcttgatgctgcggaatcaaca
atcggtcttcgtaacgtgaaatcttatgggtcagaaggacgaaagaaggatggacctcag
atatctcctagtgacaaaatatacgagtacattttcttccgtggtagtgatataaaggat
ctgcaggttatatcttcagcaacccctcaaagtacagcagttgttcctgatgatcctgcc
ataatacagactcatttccctaatccaacaccaccaaccattggcatgacatctcctggt
gctgtacaagtagcagatgttagtaccagtgcaccgtccatgctccctgttgcacctttc
ttattgaatctgcctccaaatccgttgctaccaagttctaacctttggggttcatcactt
cctcctccgcctgtaaatatcagtgggcctgctgtgcctaattattggccaggattagtt
gggtcctcaggaggagtgtctcattatcaacagcaacagcaacaacaacgttttcctcca
ccaccacaaagtttggttgcatcccttcccattcagcagcaagcgcaacaccaaaatgtg
aatgcattagccggaggatctagcttggctgcacaacatcacccattgctgctgcctatt
agtactacttcccctaatttacttcctgccatgccgtctccatctgggcaatccaatccc
aggcagcctgctaaaccggcttttaatttgttatctattccaatgccaaatgatgcattc
cgtactctttcaactgtagcagtggattcttgcccaagaactgtgtcttctctggaagcg
gaacttaatgccaatgctaatctgactccagtgaggaaagaaccaagttccgtcattagc
ccttccggttcttttccaacattttcgcaaacagtgtcatctattgtagacacaaaaggt
gcatctctcagcaatctgtccagacaatccctcttgacaccagaggtacagtcaggagag
aaggattcctcatcatctcagtcaatgaaaaatccaaactttgatgtatacactggtcaa
gcatcagtatcagaacctctgccatcagggagtactgaggaaacgctggagtcattaccg
aaatcgccaactaaaatattacgcggatctacatcatctcatcacaatagaagttacttt
gctcagagaagagatggggcacatcaagacacatcatccactcatcacaacagtagagga
ccccccgcacacagaggaaatgtgccaaatggaggtcctatttatgcacaacaaagttac
aggaaatatgcatcaggaagaggaaatgggcttattggagctgctctacattctcgtcag
agtaatatgggcatgggcagaggaaaagtgccaaatggtgttcctcaacacaatcatcgc
agcacaggaatccaattccgtgatggtgttactcaacacaatcatcgcaacacaggaatt
caatttcgggatggtgttcctcaacacaatcatcgcaacacaggaagtcattttcgggga
cgtggagctaagaatccccttgtgactaaaagattctccgaggatttcgattttgaggca
atgaatgaaaaattcaataagaaagaggtatgggattttctaggcagaagtaacaaagat
gaaccagatgaaggaatcggggatgagaaagagatgggtgaaagtgacgctgaggataca
acaggggatcgaagtgcaaaacatgataataagcctgtctattgtaaggaggacttcttt
gattctctttcttgccatgcacttgatcgtgaatctgggaaagtgaagttctccgaccaa
aggaaaaaagacgtcgagacatttggtgagattcagaagaacccatggggtcgtagtcag
agagctcgcatgtcagggggggttcaacaatcataccgtggaagaggatatgacaatgca
cgtggtgggcgtggccaaggaagaactgtttggggtcgtgtcacttga

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