Solanum lycopersicum (tomato): 101266106
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Entry
101266106 CDS
T02665
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101266106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101266106
Spliceosome [BR:
sly03041
]
Complex A
Other components
Complex A specific factors
101266106
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
eIF3g
PHD_4
RapA_C
KH_PNO1_2nd
zf-CCHC_2
Svs_4_5_6
Motif
Other DBs
NCBI-GeneID:
101266106
NCBI-ProteinID:
XP_025885735
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Position
3:complement(51370616..51376358)
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AA seq
399 aa
AA seq
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MGSQSQSPAVETLDHNSSQNLASHDAQLQASDNSCPNQASEEQKLKIQRPLLSENGLTNT
HSGTDRDQSGGEEETSSRRRRRSRWDPPPTEFTNDGTGGGDGSGTGRKRKSRWADDGSKP
VIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRKLQSGMPLDDRPEGARSPSPEPIYDNM
GIRINTREFRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEFPGYNF
IGLIIGPRGNTQKRMEKETGAKIVIRGKGSIKEGRFQQKGNLKPDPADNEDLHVLVEAEN
QESVEAAAAMVEKLLQPVDEVLNEHKKQQLKELAALNGTIRDEEFCRLCGEPGHRQYACP
SRTTTFKSEVLCKICGDGGHPTIDCPVKNTTGKKMDDEY
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccaatctcaatctcccgcagttgaaaccctagatcacaactcatcacaaaac
ctagcttcccatgatgcccagcttcaggcgtctgataattcctgtccaaatcaagcatca
gaggagcaaaaactcaagattcagaggccgttattgtcggaaaacggattgacaaacact
cacagcggcaccgacagggaccaatcaggcggcgaggaagaaactagcagtagaaggaga
cggaggagccgttgggatccacctcccactgaatttaccaatgatgggaccggcggcggt
gatggaagtgggactggaagaaagaggaagtcgaggtgggctgacgatgggtccaaaccc
gttattcaattgccagatttcatgaaagatttcactggaggtattgaatttgatcctgaa
attcaagctcttaatagtagattacttgaaattagtaggaaattgcaatcgggtatgccc
ttggatgatagacctgaaggtgctaggtcaccttcacctgaacctatatatgataatatg
ggaattcgtataaacaccagggagtttcgtgcacgagaaaagttgaatagggagagacaa
gagattatatcacaaatcattaagaagaaccctgcttttaaacctcctgctgattatagg
cctcctaagcttcaaaagaagctctacattcccatgaaggagttccctggctataatttt
attgggctgattattggtccaagagggaatactcagaagaggatggaaaaggagacagga
gcaaagattgtaattcgaggcaaagggtcaatcaaggagggcaggttccagcaaaagggg
aatttgaaacccgaccctgctgacaatgaagatttacatgtgttggtggaagctgagaac
caggagtccgttgaagctgctgccgctatggtggagaagctcttgcagcctgttgatgaa
gtgctcaatgaacataaaaagcaacaacttaaggaacttgctgctttgaatggaacaatt
agagatgaggagttttgtaggctatgtggtgaaccagggcataggcagtatgcatgtcct
tctcgcaccaccacctttaagagtgaagttctctgtaaaatatgtggtgatgggggacat
cctactatcgattgtccagtgaaaaatactactggcaagaaaatggatgatgagtactag
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