Solanum lycopersicum (tomato): 101266255
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Entry
101266255 CDS
T02665
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101266255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101266255
03009 Ribosome biogenesis [BR:
sly03009
]
101266255
04131 Membrane trafficking [BR:
sly04131
]
101266255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101266255
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101266255
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101266255
Membrane trafficking [BR:
sly04131
]
SNARE
SNARE associated proteins
Others
101266255
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101266255
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101266255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_14
AAA_22
AAA_5
AAA_33
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
nSTAND3
AAA_28
AAA_17
Parvo_NS1
AAA_18
ATPase_2
ABC_tran
nSTAND_NTPase5
Viral_helicase1
NB-ARC
AAA_7
AAA_lid_PRS2_C
TsaE
IstB_IS21
NACHT
DUF815
Zeta_toxin
Vps4_C
AAA_24
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
101266255
NCBI-ProteinID:
XP_004246640
UniProt:
A0A3Q7ISP8
LinkDB
All DBs
Position
9:2020390..2025232
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AA seq
821 aa
AA seq
DB search
MAKTKNNSAKKKIMSNKAESSDSKGTKKDFSTAILERKKSPNRLVIDEAINDDNSVVSLH
PDTMQKLQFFRGDTILIKGKKRKDTICIAIVDDKCDESKIRMNKVVRNNLRVRLGDVVSV
HQCPDVKYGKRVHILPIDDSIEGVTGNLFDAYLKPYFVEAYRPVRKGDLFLVRGGMRSVE
FKVIETDPAEYCVVAPDTEIFCEGEPVNREDENRLDEVGYDDIGGVRKQMAQIRELVELP
LRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESE
SNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLRSRAHVIV
MGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERICKET
HGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFSTALGTSNPSA
LRETVVEVPNISWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG
KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIA
TQRGSSRGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLI
YIPLPDEDSRYQIFKACLRKSPLSKDIDLRALAKYTQGFSGADITEICQRACKYAIRENI
EKDIERERRRRDNPEAMEEDVNDEVSEIKPAHFEESMKYARRSVSDGDIRKYQAFAQTLQ
QSRGFGSEFRFAGPTIGPTTGTTDPFATSAGGAADEDELYN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaccaaaaataactctgcaaaaaaaaaaatcatgagtaacaaagctgaatca
tctgattcgaaggggactaagaaggattttagtacagcaattttggagaggaagaaatca
cctaatcgtcttgtcattgatgaagcaatcaatgatgataattctgttgtttcacttcat
cctgatactatgcaaaagctccagttttttcgtggtgacacaattttgataaagggaaag
aaaagaaaagatactatctgcattgccattgttgatgacaagtgtgatgagtcaaagatt
aggatgaacaaggttgtcagaaataaccttagggttcgtcttggtgatgttgtctctgtt
catcaatgccctgatgtcaaatatggtaaacgtgtgcacattcttccaattgatgacagc
attgagggggttacaggaaatctgtttgatgcttacttgaaaccctatttcgttgaagca
tatcgaccagtgaggaagggtgatctatttcttgtaagaggaggaatgagaagtgtagaa
ttcaaggttattgaaactgatccagctgaatattgtgttgtcgccccagatactgagata
ttctgtgagggtgaacctgtaaacagagaagatgagaatcggttagatgaggttggttat
gatgacattggtggcgtgcgtaaacaaatggctcagatccgcgagcttgttgagcttccg
ttgaggcatccacaactgttcaaatctattggtgtgaaacctcccaaaggaattctcttg
tatggacctcctggatcagggaagacattgatagcgcgagcagttgctaatgagactggt
gcgttcttcttttgtattaatggaccagagatcatgtccaaattggcaggagaaagtgaa
agcaatctcaggaaagcatttgaggaagctgagaagaatgcaccttcaattatttttatt
gatgaaattgattcaatagctcctaaacgtgagaagactcatggagaggtcgagaggagg
attgtttctcagctcttgactctcatggatggtctcagatcacgtgcccacgtaattgtc
atgggtgccactaatcgccctaatagtattgaccccgccctaagaaggtttggcagattc
gatagggagatagatattggtgtcccggatgaagtcgggcgtcttgaggtgcttcgtatc
catacaaagaacatgaagctcgctgaagatgttgatttggaaaggatttgcaaagaaaca
catggttatgttggtgcggatttggcagctttgtgtactgaggctgcacttcagtgcatc
agagagaagatggatgtgattgatttggaagatgaatctatcgacgcagagatattaaat
tcaatggctgtgaccaacgagcacttctcaactgctcttgggacaagcaatccatctgcc
ctgcgtgaaactgttgttgaagttcctaatatctcctgggaggacattggaggccttgag
aatgtcaagcgtgagcttcaagagactgttcaatatcctgtggaacatcccgagaagttc
gagaagtttggtatgtctccttctaagggtgttctcttctatgggccacctggatgcggg
aaaactttgttggcgaaggctattgcaaacgaatgccaggccaattttattagtatcaag
ggtccagaattgcttaccatgtggtttggagagagcgaagccaatgttagagaaatattc
gataaggctcgagggtctgctccttgtgtcctgttttttgatgaattggactcgattgct
actcagagaggcagtagcagaggagatgccgggggagctgctgatagagttttgaatcaa
ctcctcactgaaatggatggtatgaatgccaagaaaacggttttcatcatcggtgccacc
aacaggcctgacattattgatcctgcacttctacgtcccggtcgtcttgaccaattgatt
tacattcctcttcctgacgaggattcccgctatcaaattttcaaggcatgcctgcggaaa
tcacccctttctaaggatatcgatctcagagctcttgcaaaatatacgcaagggttcagc
ggagctgacattacagagatctgtcaacgtgcatgcaaatacgctatccgagagaacatt
gagaaagatattgagagggagagaaggagaagggataatccggaagctatggaggaagac
gttaacgatgaagtatctgagatcaagcctgctcactttgaggaatcaatgaagtacgct
cgaaggagtgtgagtgatggtgatatccgcaagtatcaagcgtttgctcagacgttgcag
cagtcccgagggtttggttctgagttccggtttgcaggtcccaccatcggtcccaccacc
ggaactactgatccctttgcaacttctgctggtggtgcagcagatgaagatgagctgtat
aactag
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