Solanum lycopersicum (tomato): 101266347 Help Entry 101266347         CDS       T02665                                  Name (RefSeq) vacuolar sorting protein 39-like   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism sly  Solanum lycopersicum (tomato) Pathway sly04142   Lysosome biogenesis sly04145   Phagocytosis sly04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sly00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     101266347    04142 Lysosome biogenesis     101266347    04148 Efferocytosis     101266347  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sly04131]     101266347 Membrane trafficking [BR:sly04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     101266347 SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin TPR_19 zf-HC5HC2H TPR_WDR35 AlaDh_PNT_N zf-HC5HC2H_2 Motif Other DBs NCBI-GeneID:  101266347 NCBI-ProteinID:  XP_004243182 LinkDB All DBs Position 7:66946718..66957323 Genome browser AA seq 1004 aa AA seqDB search MVHSAYDSFELLNSCPTKIDAVESYGSNLLVACSDGSLRVYGPESSVPGQSPPADYHNQN LGLQQERYVLERTVNGFSRRQMLAMEVLVSRELLLSLSESIAFHRLPNLETLAVITKAKG ANVYSWDDKRGFLCFGRQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYMILNTTNGALSEVFPSGRIATPLVVPLPSGELLLGKDNIGVLVDQNGKLIQEGRVCWS EAPAIVVVQKPYAIGLLPRHVEIRSLRVPYPLIQTVVLRNVRRLVRSNNAVIVALDNSVF GFFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRSAKEQSIHIRYAHFLFENGSYE EAMEHFLASQVELTYVLALYPSIIVPKSSFIPEPQKFVEVGDAPYLSRASSGLSDDLDST PSHVLESDEMDIESKKMSHNTLMALIKYLQKRRYSVVEKATTEGTEEVVSDAVGDNFISY GTSRSKKPTKGRIHAPITSIARDMAAILDTALLQALILTGQFSAATDFLKVLNYCDVKIC EEFLQKRSQYACLLELYRSNSMHREALKLLHQLVEESKSEQTPVELSLKFKPDMVIEYLK PLCATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPNMQATYLELMLA MNENSISGNLQNEMVQIYLSEVLDLYAELSSQQKWDEKTFSPTRKKLLSALESISGYNPE VLLKRLPPDALYEERALLLGKMNQHELALSIYVHKLHVPELALSYCDRVYESGLQQHSAK SYGNIYLTLLQIYLNPMKTTKNFEKKITNLVSSQSPGIPKVGSGTPAKVKGGRFKKIAEI EGAEDTRFSPSGTDSGRSDGDTEDAAEEGDSTIMLDQVLDLLSKRWDRIHGAQALKLLPR DTKLQNLLPFLGPLLRKSSEAYRNFSVIKSLRESENLQVKDELYSQRKAVLKITSDSMCS LCNKKIGTSVFAVYPNGKTIVHFVCFRDSQNMKAVGRGSQSRKR NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagtgcctacgattctttcgaacttctcaatagttgtccgacgaaaatcgat gctgtcgagtcttatggttcaaatttgcttgttgcttgttccgatggatccctccgtgtt tatggtcctgaatcctccgttcccggtcaatctccgccggccgattaccacaaccagaac ttagggcttcagcaggaacgatatgtgcttgaaagaactgtgaatggattctccagaaga caaatgctggctatggaagtccttgtctcaagagaactcctgctttccctttcggagtct attgccttccataggttgcctaatttggagactttagctgtgattactaaggctaaaggt gcaaatgtgtattcgtgggatgataaaagggggtttttatgctttgggaggcagaagagg gtttgtatcttcagacatgatggggggagaggatttgtggaggtgaaagaatttggagtt cctgacacagtcaagtcgatgtcttggtgtggtgagaatatctgcttggggattagaaga gagtacatgatattgaatactaccaatggtgcattgtctgaggtgtttccttcggggagg atcgccacacctcttgtggtgcctcttccctctggagaacttcttttgggcaaggataat attggtgtcttagttgaccaaaatggaaagttgatccaagagggcagggtttgttggtca gaggctcctgcaattgttgttgttcagaagccctatgccataggtcttttaccgcgacat gttgagatacgctctcttcgtgttccttatcctttgattcaaacagttgtccttcggaat gttcgtcgtcttgttcgaagcaacaatgctgtcattgttgctcttgataattctgttttt ggatttttccctgttcctctcggtgcacagattgtacaactaacagcctctggaaacttt gaggaggccttggctttgtgcaaattgctaccaccagaagattcaagtcttagatctgca aaggagcaatcaattcatataagatatgcacacttcctgtttgaaaatgggagctatgaa gaagcaatggaacattttctggcatctcaagttgaactcacttatgtgcttgccttatat ccatccattattgttccaaaatcatctttcatacctgaaccacagaaatttgtggaagtt ggggatgcaccgtatctctcccgagcttcctctggtctgtcagatgatctggattctacg ccttcacatgtcttagaatctgatgaaatggatatagaatccaaaaaaatgagtcacaac actttgatggctctgattaagtatttacagaagagaagatacagtgttgttgagaaagcc acaactgagggcactgaagaggtcgtttcagatgctgtcggagataatttcatttcttat ggaactagccggtccaaaaaaccaaccaagggcagaattcatgctccaatcacttccatc gctagggatatggctgcaatactggacactgcacttcttcaagctcttatattaactgga cagttctcagcagctacagattttctgaaagtcctcaactactgtgatgtgaaaatatgt gaggagttcctgcaaaaaagaagccagtatgcttgtctgctagaactttataggagcaat tcaatgcatcgtgaagcacttaaacttctccatcaattggtagaagagtccaagtcagag caaactcctgtagagctctcattgaagttcaagcctgatatggtcattgaatatctcaaa cccctttgtgcaactgaccccatgcttgtcctggagttctcattgcccgttcttgaaagc tgtcctatgcaaaccattgagctattcttgtctggtaatattccagcggacttggtgaat tcttacttaaaacagcatgctccaaacatgcaggcaacatatctggaactcatgcttgcc atgaatgaaaatagcatctccgggaatctgcagaatgaaatggtgcaaatttatctctca gaagtgcttgatttgtatgctgaacttagttcccagcaaaaatgggatgaaaaaacattt tctccaacaaggaaaaagcttttgtctgctttggagagtatatccgggtataatccagag gtgttgcttaagagacttccaccagatgctctgtatgaagaacgtgcacttctgttgggg aaaatgaatcaacatgaacttgcgctatctatttatgtgcacaagcttcatgttcctgaa cttgcactgtcctattgtgatcgggtgtacgagtcaggacttcaacaacattccgcaaaa tcttatggaaacatttacctgactctactgcaaatctatctcaatcccatgaagacaaca aaaaattttgagaagaaaattactaatctggtatcatctcagagccctgggattccaaaa gttggttcaggaactccagcaaaggtaaaaggaggccgcttcaagaaaattgctgaaatt gagggcgctgaggacactcgattcagtccaagtggcactgacagtggtaggagcgatgga gatacagaagatgctgccgaggaaggagattctactattatgctagatcaggtgctggat cttttgagcaaaaggtgggatcggatccatggggcccaagctctgaaactactaccaagg gacactaaactacagaacttgcttccatttcttggacctctcctgagaaaatccagtgaa gcgtatcgaaacttttcagtgataaaaagcttgagagaaagtgaaaatctacaggtaaaa gatgaactgtatagtcaaagaaaagcagtcttgaagatcacaagtgatagcatgtgttct ctttgcaacaagaagattggcaccagtgtctttgcagtgtatcctaatggcaagacaatt gtgcattttgtttgctttagagattcacagaatatgaaggcagttggaagaggctctcag tcaaggaaaagatga

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