Solanum lycopersicum (tomato): 101266384
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Entry
101266384 CDS
T02665
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101266384
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101266384
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101266384
Protein phosphatases and associated proteins [BR:
sly01009
]
HAD phosphatases
Fcp/Scp phosphatases
101266384
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101266384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
101266384
NCBI-ProteinID:
XP_004232844
UniProt:
A0A3Q7F419
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All DBs
Position
2:complement(59402800..59413440)
Genome browser
AA seq
954 aa
AA seq
DB search
MFKSTVLLYEGERLVGEVEMYGEKGVVWGEKLIRISHYSPSSERCPPLAVLHTVTTGLSF
KLEPTKSKPLTQDSPLTLLHSTCLRDNKTAVMSLGREELHLVAMQSKNIGGQCPCFWGFK
VASGLYDSCLTMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKINSESDPQRASVM
LAEVKRYQEDKIILKQYAENDQVVDNGKVIRSQSEVFPALSDNHQPIVRPLIRLQDRNII
LTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDS
NLINSQELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDDKDQPRVHVVPA
FAPYFAPQAEGNNSVPVLCVARNVACNVRGGFFKDFDEGLLQRISEVAYEDDIKQVPSAP
DVSNYLISEDDPSAVNGNKDSLGFDGMADSEVERRLKEAMLASTSVPSQMTNLDPRLVPA
LQYPVPPVISQPSIQGPVVPFPTQHLPQVTSVLKSSVTQISPQDTSLQSSPAREEGEVPE
SELDPDTRRRLLILQHGQDTRDQVSSEPKFPIGTPLQVSVPPRVQPHGWFPAEEEVSPRQ
LNRPLPPKEFPLNPESMHINKHRPPHPPFLPKMETSMPSDRVFFENQRLPKEVIPRDDRM
RFSQSQPSFRPPGEDVSLGRSSSSNRVLDLDPGHYDPYLDTPAGALQDIAFKCGVKVEFR
SSFLSSPELQFCLEVLFAGEKVGEGIGRTRREAQRHAAEESLMYLADKYLSCIKADSSST
QGDGFRFPNASDNGFVENMSPFGYQDRVSHSFASEPPRVLDPRLEVFKKSVGSVGALREL
CAIEGLGLAFQTQPQLSVNPGQKSEIYAQVEIDGQVFGKGIGPTWDDAKTQAAERALVAL
KSELAQFSHKRQGSPRSLQQQGFSNKRLKPEYSRGVQQRVPLSGRFPKNTSAMP
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatcgacggtgttgttgtatgaaggagaaagattggtgggagaagttgaaatg
tacggtgagaagggtgtggtatggggggagaagttaataaggatatctcactattcgccg
tcaagtgagagatgtccaccactggcagtgctacacacagttactactggattaagcttc
aaattggaacctacaaaatcaaagccgctgacccaagactcgccgctcactcttttgcat
tccacatgtctcagagataacaagactgcagtgatgtcacttggaagagaggaacttcat
ttagtcgccatgcagtctaagaatattggcggacaatgtccttgcttttggggatttaag
gttgcatcagggctttatgattcttgtctaacaatgctaaacctcaggtgtcttggcatt
gtatttgatcttgatgagacactcatagttgccaacacaatgcgttcatttgaggataga
atagaggccttgcagcggaaaataaattcagagtcagatccgcaacgtgcctctgttatg
ctggctgaggtcaagcgttaccaggaggataaaattattttaaagcaatatgccgaaaat
gatcaggttgttgacaatggaaaggtgatcagatctcagtctgaggttttccccgcattg
tctgataatcaccaacctattgtcagacccctgattaggttgcaagatagaaacattatt
cttactcgtattaatccaatgatccgtgatactagtgttcttgtgagattgagacctgct
tgggaggatctccgcagctatctgactgcaaggggtcggaagcgctttgaagtttatgtg
tgcacaatggctgaaagagattatgctttagaaatgtggcgccttcttgatccagattca
aacttgattaactcacaagaactcttggatcgtattgtctgtgtcaagtctggcttgagg
aaatctttgttcaatgtattccaagatggaaattgtcatcctaagatggcattggtgatt
gatgatcgcttgaaagtgtgggatgataaggatcaacctcgagtgcacgttgttcctgca
tttgctccatattttgcccctcaagctgaaggcaacaattctgttcctgttctttgtgtt
gccagaaatgtagcctgcaatgttagaggtggttttttcaaagattttgatgaaggccta
ttacagcgaatatctgaagttgcatatgaagatgatattaaacaagttccttctgctccc
gatgttagcaactatttgatttcggaggatgatccttcagctgtaaatgggaataaagat
tcacttggatttgatggaatggctgatagtgaggttgaaagaagactgaaggaagcaatg
ttggcttcaacaagtgttccttctcaaatgacaaatttggatccaagacttgtaccagct
ctccagtaccctgtcccacctgttatttcacaaccaagcattcaaggcccagtggtgcct
tttcctactcaacatctccctcaagtgacttctgtacttaaatcatcagtgactcaaata
agtcctcaggatacaagcttgcaaagttctcctgctagggaagagggtgaggtaccagaa
tctgaattagatcctgatacaaggaggagattacttatattgcagcatggtcaagacacg
agagatcaagtatcaagtgaaccaaagttccctattgggactccattacaagtatctgtg
ccaccacgggtgcagccacatggttggtttccggctgaggaagaggtgagccctaggcaa
cttaatcgacccttacctcccaaggaatttcctttaaatccagagtctatgcatattaac
aaacatcggcctcctcatccaccttttcttcccaaaatggagacttctatgccatctgat
agagttttttttgagaaccaaaggctgccaaaagaggtaatccctcgggatgacaggatg
agattttcccaatcacaacctagctttcgcccaccaggtgaggatgtttccttgggtcgg
tcatcttccagcaacagggttcttgaccttgatcctggacattatgatccatatctagat
acacctgctggagctttacaagatattgcattcaagtgtggagtgaaggtcgaattcaga
tcaagttttctttcgagtccagaactgcagttctgcttggaggtgttgtttgcaggagaa
aaggttggagaaggaatcggccggacgagaagggaagcgcaacgacatgctgctgaggaa
tctcttatgtatctggccgacaaatacttgtcatgtatcaaagctgattccagttccact
cagggtgatggatttaggtttccaaatgcaagtgataatgggtttgttgagaacatgagt
ccttttgggtatcaagatcgtgtctcacattcttttgcatcagagcctcccagagtgttg
gatccaaggcttgaggtttttaagaagtcagtgggttcagttggcgccctaagagaacta
tgtgcaattgaaggacttggtttggcatttcaaactcagcctcaactttcagttaatccg
ggccagaaaagtgaaatatacgcccaggtggaaattgatggccaagtatttggcaaagga
attggtccaacgtgggatgatgctaaaacacaggctgctgaaagggctcttgttgctctg
aagtctgagctggctcaattttctcacaagcgccagggttctccaagatcattgcagcag
cagggattttctaataaaagattgaaacctgaatattctcggggtgtgcagcagagagta
ccattgtctggtagattcccgaagaatacttccgctatgccatga
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