Solanum lycopersicum (tomato): 101266467
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Entry
101266467 CDS
T02665
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101266467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sly03400
]
101266467
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101266467
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
101266467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
divDNApol
Motif
Other DBs
NCBI-GeneID:
101266467
NCBI-ProteinID:
XP_010312825
LinkDB
All DBs
Position
1:85394356..85408741
Genome browser
AA seq
1975 aa
AA seq
DB search
MADSQADSKFFSVRIVSIDYYMTAPLPGFDICYSSFQGGRVNEVPVIRVYGATPGGQKTC
LHLHGALPYFYVPCSELFLQSDEKGSECTNALALALEKVLKLKGNAGSKRQHVHGCSLVR
ARKFYGYHSSEELFLKIYLYHPQDVSRAANLLLGGAVLDKSLQPHESHIPFLLQFLVDYN
LYGMGHLHVSKMKFRNPTPDTFSPRKANCVDRRRPSDMSTSTTAEFQVDLDGESCFNMPI
WISSTIPDNWIWKLSSQADPSTDPDIPNIKRQSISELEGDASVDAIMNQQLISYMSLSQT
CSQEKMVQSLIPIWEEEFARNGVHEVGLPPDPGKPLRDDVLRTLSHWIGYEEILMGLSND
VKVSSDMLQSVNLSMNDGNIANIGHCGSLNSIREPSRCPEEGLFQGHVLEKRVGTDACPK
QLLADQLEATVSMVASQDVKASDQDALRLLNWLASSQAAEDINSDDDLARETILSPLMPA
TTIDTALEKANVAYENESQQECEDILDSVHDCYFEELDRKTSQSISNDHSCRSSTSTMIP
QLDGSNDDPSPISFVNESSETPKRTRTSSQADSWNKATLATSNKHKKEKTGYCSLPIALG
QNLNDSHLTPSIHICDERDGRGTFSHMNFNKYPNFLTRSSKESANCEVESGMIVECSTRD
LMRLKRSYQAEPSEYGNQVKKVQLGAKGKEDSSFNSESIHDEKEKMPHDFLISRSAITDQ
PRECHERNPLALQLQVEPGDIKADKSNSPPHDKLPLLCSSMQENASTSQGTKDLSQLPDV
ENKRSAVYMGGCGCCSCENIDSCVICTKISDPDLCTSIVAPCSRFTSETEEKFPGCGKLL
QTNVIGLSQSSASPSCSISTVVGVSADDLELKGMTFIKKPPKVEFTDEPRRNAQSACGTP
SYHVNKKNKIRTCDQDRGLDECPPFFEGNCLVKEKISSANCGTSNYVPCQDNLLGVPVHY
QNDGSYLYMLTPVYSPPRSESVRRWLSLDYVVSSKMDVVSAPPVYPSTKVCSDHIAESQD
SQSTFCDQPLMYSGSEPNPNQLQANKKCQEKNGVQMNPVVPDARIKQDEEIILKCEPSMR
GSQDLSQISGPDRKSRLTPLSQTGFRDPASIGCGQQLTILSLEVQAESRGDLRPDPRFDA
VRIIVLVFQEDDDFGSDTHVLLHCNGESVQRNLDGVSECKVLTFIEERQVFFHIIKMINS
FDPDIFMGWDIQGGSLGFLAERAAYLGIGLLNKISRTPSEGNIASRDSEGGKLSDILSEA
VAADPMFHEDAAIIDDEWGRTHASGVHVGGRIVLNIWRLMRGEVKLNLYTLEAVAEAVLR
RKFPYIPNKVLTNWFSSGPERARYRCIEYFLERTKLNLQIMNQLDVVNRTSELARIFGID
FFSVLSRGSQYRVESMFLRLAHAQNYVAISPGNQQVASQPAMECIPLVMEPKSGFYADPV
VVLDFQSLYPSMIIAYNLCFCTCLGKVTSTNANILGVSSYSPDTNVMHNLKDEILLTPNG
VMYMPPRVQKGVLPRLLEEILDTRIMVKTAMKKLAPGQQVLHRIFNARQLALKLIANVTY
GYTAAGFSGRMPCAELADSIVQCARRTLESAISFVNTNHRWNAKVIYGDTDSMFVLLEGR
SVEEAFRIGHEIASEVTAMNPNPVTLKMEKVYHSCFLLTKKRYVGYSYENVGQSKPVFDA
KGIETVRRDTCEAVSKIMERSLRVFFEYRDIEKVKSYLVRQWKKIISGRVSLQDFVFAKE
VRLGTYSAQASSLPPAAIVATKAMRVDPRAEPRYAERVPYVVVHGEPGARLADVVVDPLD
VLSIDSPYRLNDIYYIKKQIIPALQRVFGLVRADLNQWFSDMPRPGREASGKRHRFTANA
HRTRIDYYYLSKHCIICGELTQASSYVCQNCSSNEAIVAAALTGRTSVLERNIQHLAAIC
RHCGGGDWLIESGVKCTSLACSVFYERRKIQKELQSLSGVTTEAGFYPRCVVEWF
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcaggccgattcgaaattcttcagtgttcgaattgtttcaattgactat
tacatgaccgctccacttcctggttttgacatttgttacagcagtttccaaggtgggaga
gttaatgaagtcccggtgatcagagtgtacggcgccactcctggtggccagaagacatgc
ttgcaccttcatggagccctgccttacttctatgttccatgctcggagctcttcctccaa
tctgatgaaaaagggagcgaatgcacgaatgctctagctcttgctcttgagaaggtgctc
aagcttaaaggcaatgctggttccaaacgtcaacatgtccatggctgcagccttgtacga
gcaaggaagttttatggttatcattcttcagaggaactgtttttgaagatctatctctat
catccacaagacgtttcacgtgctgccaatcttcttctgggaggcgcagtactggataag
tcattacagccccacgaatctcatattcctttccttcttcaatttctggttgactataat
ttgtatgggatgggccatctacatgtatctaagatgaagttccgcaatccaactccagat
actttctccccaaggaaagccaactgcgttgacagaagaaggccttctgatatgtccact
tccactactgcagagtttcaggttgatttagatggtgagtcttgtttcaatatgccaatt
tggatatcttctacaattccggacaattggatctggaaattatctagtcaggctgatcct
tcaacagacccagatattcctaacattaagcgacaaagtatctctgaacttgaaggagat
gctagtgttgatgcaattatgaatcagcagttgatatcctatatgtcgctttcacaaacc
tgttcccaagagaaaatggttcagtcactaataccgatttgggaggaggaatttgcgagg
aatggggtgcatgaagtgggcttgcctcctgatcctggtaaaccacttcgagatgatgtc
ttgagaacactttcacattggattggatatgaagagatcctaatgggattaagcaatgat
gtgaaggtttcttctgatatgctgcagtcagtcaacttatcaatgaatgatgggaacatt
gccaatattggacattgtggctctttaaatagtatacgagaaccgtccagatgcccagaa
gaaggattatttcaaggtcatgttttggaaaaaagggtgggaactgatgcatgtcccaaa
caattgttagctgatcaattggaagcaactgtttccatggtagcctcacaagatgtgaag
gcttcagatcaggacgctttaagacttctaaactggcttgcatcttctcaagctgcagag
gacataaactctgatgatgaccttgctcgggaaaccattttgagccctttaatgccagca
acaactattgatacggcgttggagaaggcaaatgtagcctatgagaatgaatctcagcaa
gagtgtgaggacattcttgattctgttcacgattgttattttgaagaattagacagaaag
acttctcagtccatcagcaacgatcattcatgcagaagttcaacgagtacgatgattcct
cagctggatggctccaatgatgatccaagccccatttcttttgttaatgagtcatctgaa
acaccaaaaagaactaggacatcttcccaagcagattcttggaataaggctactttagct
actagcaataaacacaaaaaggaaaaaacaggatattgctctttaccaattgctttgggt
cagaatttgaatgattcacatctcacacctagcattcacatttgtgacgaaagagatggc
agaggaactttttctcacatgaattttaacaaataccctaattttctaacgagaagttcg
aaagaatctgctaattgtgaagtggaatctggtatgatagttgaatgctctacacgtgat
ttgatgaggctcaaaagatcttatcaggctgagccttctgaatatggaaatcaggtaaaa
aaggtacaacttggtgcaaaaggaaaagaggattcttcttttaattcagaatccattcat
gatgagaaagagaaaatgcctcatgatttcttgatatctcgatcagcgatcacggatcag
cctagagaatgtcatgaaaggaaccctcttgcacttcagttgcaggttgagcctggtgac
atcaaagctgacaaatcaaatagtcctcctcatgataagttgccacttctatgtagctct
atgcaggaaaatgcatcaacatcacaagggactaaagatctatcccagcttcctgatgtt
gagaataaaagatctgccgtttacatgggaggctgtggatgctgtagttgcgaaaatatt
gacagctgtgtgatatgtacaaaaatttcagatcctgatctttgtacttctatagttgct
ccatgttctcggttcacatctgaaactgaagaaaaatttcctggttgtgggaaattgctg
caaacgaatgttataggtttaagtcaatcttctgcttctcctagttgttcaatatctaca
gtagtcggtgtatctgctgatgatctggaacttaaaggcatgaccttcatcaagaaacct
cctaaagtggagttcacagatgaacctagacgcaatgctcagtctgcatgtggtactcct
agttaccatgtcaacaagaaaaataaaataaggacatgtgatcaggatagaggtttagat
gaatgtccccctttctttgaggggaattgccttgttaaagaaaagatttccagtgcaaat
tgtggaacaagcaactatgttccttgtcaagacaatttgttgggtgtacctgttcattat
caaaatgatggatcttatttatacatgttgactcctgtatattcaccaccacgaagtgaa
agtgttcgtcgatggctgtcacttgattatgtagtttcttctaaaatggatgtggtttca
gccccaccagtgtacccatcaacaaaggtttgctctgatcatatagcagaatcacaggat
tctcaatccactttttgtgatcaacctttgatgtattctggttccgaaccaaatccaaat
cagcttcaagctaacaaaaaatgtcaggaaaagaatggcgtacaaatgaatcctgttgtc
cctgatgcaagaataaaacaagatgaagaaattattttgaaatgtgaaccatcaatgcgt
ggatctcaagatctctcccagatatctggtcctgatagaaaatcaaggctaactccgtta
agtcaaactggctttcgagacccggctagtattggttgtggacagcagttaacaatatta
agcttagaggtccaagcagaatcaaggggtgatctgagacctgatcctcggtttgatgcc
gtaagaattattgttcttgtttttcaggaagatgatgattttggatctgatactcatgta
cttttgcattgcaatggtgaatcagttcaaagaaaccttgatggagtatctgaatgtaaa
gttttaactttcattgaagagaggcaagtgttttttcatatcataaagatgattaattct
tttgacccagacatatttatgggctgggatattcaaggtggttcccttggttttcttgct
gaacgggctgcataccttggcattggtttgcttaacaaaatatctcgcactccatctgag
ggcaatatagcttctagagactctgaaggaggaaaactaagtgatattttatctgaagct
gttgctgctgacccaatgtttcatgaagatgctgctataatagatgatgaatggggccga
actcacgccagtggcgtccatgtagggggtagaattgtccttaacatttggcgactgatg
cgtggtgaagtgaagctgaatttgtacacacttgaggccgtggctgaagcagtgctgaga
cgtaaatttccatatattcctaacaaggtattgacaaattggttttcaagcggtcctgaa
cgtgcaagatacagatgtatagaatactttttagagaggacaaagctgaaccttcaaatc
atgaatcaacttgatgtggtaaatcgaacatcagagcttgcacggattttcggcatcgac
ttcttttcagttctttctcggggttcacagtaccgtgttgaatcaatgtttctgaggttg
gctcacgcacagaattatgttgccatttctcctggaaaccaacaagttgcctctcaacct
gccatggaatgtataccccttgtcatggaaccaaaatctggattttatgctgaccccgtt
gtcgttttagattttcagtcactttatccatcaatgataattgcatataacctctgtttc
tgtacttgccttggtaaagttacttctacgaatgctaatatcctcggggttagttcatat
tcacctgatacaaatgtgatgcataatttaaaggacgaaatattgctcactccaaatggt
gttatgtatatgcctcccagggtccagaagggggtattacctcgcttgttggaagaaatt
ttggatactaggattatggttaaaacagcaatgaagaaattggctcctggacagcaagtt
cttcaccggatattcaatgctaggcaacttgctttgaagctcatagcaaatgtgacctat
gggtatacagcagctggatttagtgggcgcatgccctgtgctgagctcgctgacagtatt
gtccagtgtgcccgtagaacattggaaagtgctatttcatttgttaacacaaatcacagg
tggaatgctaaagttatttatggtgatacggacagtatgtttgtactcctcgaaggacgg
tctgttgaagaagcttttcgaattggtcatgaaattgcatcagaagtaactgcaatgaac
ccaaatccagtcacgttaaagatggaaaaggtttaccattcatgcttcctccttactaag
aaacgatatgttggttatagttacgagaacgttggccaaagcaaaccagtgtttgatgct
aaaggtattgagacagtacgaagagatacatgtgaggctgtgtccaagataatggagcgc
tctttaagagtcttttttgaatatagggatattgagaaggtaaaatcttacctggtgcgt
cagtggaaaaagattatatcaggcagagtatctcttcaggattttgtgttcgcaaaagag
gtacgattaggcacctattctgcacaggcttcttcacttccaccagcagcaattgttgcc
actaaagcaatgagagttgacccgagggcagaacctcggtatgcagagcgagtgccttat
gttgtggttcacggtgaaccgggtgccaggctggctgatgtcgtggtagatcccttggat
gttctttcaattgattcgccttacaggttaaatgacatatattacatcaagaaacagata
atcccagctctgcaacgagtatttgggctcgttcgagctgacttgaatcaatggttttca
gatatgcctcgtccagggcgggaggcttctggtaaacgtcaccgatttactgcaaatgca
cacagaactaggattgattattactatctgtcaaaacattgtatcatatgtggagaactg
acccaggcatctagttacgtctgtcagaactgctccagcaatgaagctatagttgctgct
gctttaacaggaagaacttcagtattggaaagaaacatccaacaccttgctgctatatgt
cggcactgtggaggaggagattggctcatagaaagtggggtgaaatgcacatctctcgca
tgttctgttttctacgaaaggaggaaaatccagaaagaactgcaatctctctctggtgtt
actacagaagcaggtttttatcccaggtgtgtagtggaatggttctaa
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