Solanum lycopersicum (tomato): 101266481
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Entry
101266481 CDS
T02665
Name
(RefSeq) nuclear pore complex protein NUP98B-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101266481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101266481
03036 Chromosome and associated proteins [BR:
sly03036
]
101266481
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101266481
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101266481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Troponin-I_N
Motif
Other DBs
NCBI-GeneID:
101266481
NCBI-ProteinID:
XP_004233600
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All DBs
Position
2:70564734..70572240
Genome browser
AA seq
946 aa
AA seq
DB search
MQPNSFFFSIYIPPFHYIDNQQSSLLLRLMSIFFGNTASNFNAATNATSGQTQNSSTNSS
TSPTFGKKYDFNSVANEPLVGSRDVNVSDSSIFGYPRAPAFGVSSNSHFGTARLDSYSFG
QPAVSMSGSKGEESTPPFFMSSGFGKSTFGINQKGSRIASYIATPENDITGFSGGKIQSI
CGMQAYKDKSQEELRFEDYQLGDKGTLAFNAATNATSGQTQLIFPGSSFSQTFGKKYDVN
SMTNEPLFWSRDANASGFSKFGSLQATSFGVSSNSHFGTPSFNSYSFGQPAISMSGIKDQ
TCKAGKESTTPLLQNSGFGKSAFGINQKGSRTTSYIATPDIDSTCLFGGRIQSICGMQTY
QDKSQEELRFEDYQLGDKGQECGSSFSVSTAQGFGLINNTRPFISPALNQSTVDQPFYSH
FPSTFTVERAGVDSLSKNSTSLAQQAISHIFPPNPSLLNSCGTRNRVQSTASDVSFSPWN
NSNQFAPFKPASSSSTAFTTPLRNPFSLSTSAPLSPCSVSPSTYPLLTKPSGHDFYQKNS
FSTTPVLTTGGASQSTLCLNCLKQSQPTPPGLSNVSSTPLAANQNTPLFIGPLQPEITPK
VGTTLPTTNASHPTTGASCSEIGQGVGQQPSMNGQQSYFPVIMEVKPSPNMPPAETQPSD
QISVEHPYLVTSIQYGISSLPVSDNPAPVRRRSSLIIRHSSLTHHRLPPQKYKPTSDKPK
VPFFMDKENATGVLKTEVIIIPRENPRDWVRPTTESPQGADTSMDRMHDGDKVLHKLKLQ
SEETHHDNCGDDEDVDGIMPKLQRADYYTVPPIEELLLKEKEEAGFCCHVKDFVVGRHGY
GSIKFLGETDIRKLDLDSAVHFNHREVIIYMDESKKPPVGQGLNKPAEITLLNVKCINKS
SGKEYRDGPMVNKYKDMLIKKAVEQHAEFVSYDPVEGQWKFRVSHF
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaaactctttcttcttctctatttatataccgccattccactatattgacaat
caacagagttctcttcttctccgtctcatgtcgatattttttggaaacaccgcttcaaac
tttaatgcagcaacgaatgctacatctggtcaaacacaaaactcatctacgaattcgtct
acttcaccgacatttggaaagaaatatgactttaatagtgtggccaatgaacctttggtg
gggtctagggatgtcaatgtctcggactcctccatatttggatatccaagagctcctgca
tttggtgtttcaagcaactcacactttggcaccgcaagacttgattcatactcctttgga
caaccggcagtatctatgtcagggagcaaaggagaagaaagtacaccgccttttttcatg
agctctggttttgggaagtcaacatttggcattaatcagaaaggaagtagaatagcatca
tatattgcaactccagagaacgatatcacaggattcagtggcggaaaaattcaatccatt
tgtggaatgcaggcttataaagataaaagccaagaggagttgaggtttgaggactaccag
ttaggtgataaaggaacgttagcatttaatgcagcaacgaatgctacatctggtcaaaca
caacttatatttccgggctcatccttttcacaaacatttggaaagaaatatgacgttaac
agtatgaccaatgaacctctgttttggtccagggatgccaatgcctcaggcttctccaaa
tttggatctttacaagctacttcatttggtgtttcaagcaactcacactttggcacccca
agttttaattcctattcctttggccaaccagcaatatccatgtcagggatcaaagatcaa
acttgcaaagcaggaaaagaaagtacaacacctttgctccagaactctggttttggaaag
tccgcatttggtattaaccagaaaggaagtagaacaacatcatacattgcaactccagat
atagatagcacatgtctctttggtggacgaattcaatccatttgtggaatgcagacttat
caagataaaagtcaggaggagttgaggtttgaggactaccagttaggtgataaaggtcag
gaatgtggttcttcatttagtgtttccaccgcacagggatttggtctcatcaacaacacg
aggcctttcatatcaccagcattaaaccaatcaactgttgatcaacctttttattcccat
tttccaagtacatttacagtggaaagagcaggggttgactctctatcaaaaaattctacc
tcattagcacaacaggccatttcccatatatttcccccaaacccgtcattgttgaactct
tgtggcactagaaatagagtgcaatctactgcctcagatgtttccttttctccgtggaac
aattcaaatcagtttgcaccttttaaaccagcttccagttcttccactgccttcactact
ccattaaggaacccattttctttatcaacatctgcccctctatctccatgttcggtctca
ccttccacatatcctttgttaactaagccatcaggccatgatttttatcagaagaactct
ttttctaccactcctgttttaactacaggaggcgcttcacaatccacgttatgcttgaac
tgcctaaagcagtcacagcctactccaccaggactttctaatgtttcaagcactccactt
gctgcgaatcaaaatactcctctgttcattggtcctctgcagccagaaataactcctaaa
gttggaacaacactcccaacaaccaatgcttctcacccaacaacaggtgctagttgctca
gaaattggacaaggagttggtcagcagccaagtatgaatggccaacagtcttactttccg
gtcatcatggaagtcaagccatcaccaaatatgcctcctgccgaaacacaaccttcggac
caaatctcagttgagcacccgtatttggtaacatccatccagtatggaatttctagttta
cctgtttctgacaaccctgctccggtcagacgaagatcttcgttgataattcgacattca
tctctaactcatcataggttgccacctcagaaatacaaacctacaagtgataaaccaaag
gtaccctttttcatggataaagaaaacgctactggtgtactaaagacagaagtcatcatc
attccaagggaaaacccaagggactgggttcgtcctaccacagaatctccacaaggggct
gatacatctatggacaggatgcatgacggagacaaagttcttcataagctaaagttacag
tctgaagagacgcatcatgataattgtggcgatgatgaggatgtggatggcataatgcca
aagcttcaacgtgctgattactacacagttcctcctatagaggagttgctattaaaggag
aaggaagaagctggtttttgttgccacgtgaaggactttgtggtaggaagacatgggtac
ggaagcatcaagttcttgggagaaacagatatccggaagcttgatcttgattctgctgtt
catttcaaccatcgcgaggtgatcatctatatggatgagagcaagaaacccccagttgga
caaggcctcaacaaaccagctgagataactctccttaatgtcaaatgcatcaacaaatca
agtggtaaggagtacagagacggaccaatggtcaacaagtacaaagatatgcttattaag
aaagcagtagaacaacatgcagaatttgtttcttatgatccagtggaagggcagtggaag
tttagggtatcacacttctaa
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