Solanum lycopersicum (tomato): 101266569
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Entry
101266569 CDS
T02665
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
sly03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101266569
03083 Polycomb repressive complex
101266569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101266569
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
101266569
Histone modification proteins
HAT complexes
HATB complex
101266569
HDAC complexes
Sin3A-HDAC complex
101266569
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101266569
PRC2.2
101266569
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
101266569
Heterochromatin formation proteins
Other heterochromatin formation proteins
101266569
Chromatin remodeling factors
NuRD complex
101266569
NuRF complex
101266569
NuRF complex (fruit fly)
101266569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
101266569
NCBI-ProteinID:
XP_004231043
UniProt:
A0A3Q7EU86
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All DBs
Position
1:complement(93914239..93917186)
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AA seq
403 aa
AA seq
DB search
MAEEELEAAGETEQDVEEEFAVWKKNTPLLYDLVVCHALEWPSLTVQWLPSPTTDDGAFA
VHKLILGTHTSDDCPNFLMVAKVHLPRNPASGLEHNLMNPQIPKVEIVQKIHVDGEVNRA
RCMPQKPAVVAAKTSSSEVYVFDSAKQPLDHEGGSCNPDVRLRGHDKEGYGLSWSPFKEG
FLLSGSNDQKICLWDISALPQDKVLMAHHTYEEHEDVVEDVSWHPKNENLFGSVGDDCRL
IIWDFRTNKAQHSVLVHEKEVNYLSFNSYTEWVLATASSDSTVGLFDMRKLSSPLHVFGS
HTDEVFQVEWDPNHETVLASSGGDRRLMVWDLNRIGDEQLEGEAEDGPSELLFSHGGHKA
KISDFSWNKNEPWVISSVAEDNCVQVWQMAESIYREDNDNGNC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaagaattggaggcggcgggagaaaccgaacaagatgtagaagaggagttc
gccgtttggaagaagaacacgccgttgctctacgatcttgtcgtttgtcatgcccttgaa
tggccttctctcaccgttcaatggcttccgtctccaaccaccgacgacggtgcttttgct
gtacacaagctcattctcggaactcacacctccgacgattgccccaacttcctcatggtc
gcaaaggttcatctccctcggaatcctgcttcaggacttgaacacaatctcatgaatcct
caaatccctaaggtagagatagtacaaaagattcatgttgacggagaagtgaatagagcg
agatgtatgccacagaagccagctgtagttgcagctaagactagtagctctgaagtttat
gtctttgactcagctaaacagccccttgatcatgaaggtgggtcttgtaaccctgatgtt
cgacttcgtgggcatgataaagaaggttatggcttgtcgtggagcccgtttaaagagggt
tttcttttgagtggttcaaatgatcagaagatttgtttgtgggatatatctgcattgcct
caagataaagttcttatggctcatcatacttatgaggagcatgaagatgtagttgaggat
gtgtcatggcatccaaagaatgagaacctatttggttctgtcggagatgattgtcgtctg
atcatttgggacttccggacaaacaaagcccaacactcggttttagtgcatgagaaagag
gtgaattatttatctttcaactcatatactgaatgggttcttgctacagcatcgtcagat
agtactgttggtctgttcgacatgcgaaagcttagctctccattgcacgtgtttggcagt
catacggatgaggtgttccaggtagaatgggatcctaatcatgagactgtactggcatct
tcaggtggtgatagaaggttgatggtctgggatcttaacaggattggtgacgagcaattg
gaaggggaagctgaagacggaccgtcagaacttcttttctctcatggcggtcacaaagca
aagatatctgatttttcatggaacaagaacgagccatgggtcatttcaagtgtggcagaa
gacaactgtgtccaagtctggcagatggctgagagcatctaccgtgaggacaatgacaat
ggcaactgctga
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