Solanum lycopersicum (tomato): 101267059
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Entry
101267059 CDS
T02665
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101267059
03012 Translation factors [BR:
sly03012
]
101267059
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101267059
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
eIF-3
101267059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
ANAPC4_WD40
RRM_1
IKI3
DPPIV_N
Motif
Other DBs
NCBI-GeneID:
101267059
NCBI-ProteinID:
XP_004229693
UniProt:
A0A3Q7EK17
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All DBs
Position
1:83010357..83015751
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AA seq
717 aa
AA seq
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MSEVVSMDEIRAISERLGVDLAKINLDSIHLPPGDDMGIPSDDEDLLKEDALEEDQGFGN
ILVVDNLPVVPKEKYEKLEGVVRKIYSQLGVIKEGGLNMPVDPVTQKTLGYCFIEYNTPQ
EAELSKEKTHGYKLDRSHIFAVNMFEDIEKFLKVPDEWAPPEIKPYVPVEMLQKWLTDDK
ARDQYVIRSGGDTEVLWNDARQMKPELVYKRPYWTESFVQWSPMGTYLATVHRQGAAIWG
GATTFNRLMRYAHPQVKLIDFSPGERYLVTYSSHEPSNPRDTHRVVLNIFDVRTGKVMRD
FKGSADEFAVGGTGGVTGVSWPVFRWSGGKEDKYFARIGKNVISVYETETFSLIDKKSIK
VENVMDFSWSPTDPILSLFVPECGNQPARVSLVQIPSKEELRQKNLFSVSDCKMYWQSNG
DYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVI
HGDNPRPDVSFYSMRSGTNTGRVSKLTTLKGKQANALYWSPGGRFIILAGMKGFNGQLEF
FDVDELDTMASAEHFMATDVEWDPTGRYVATAVTSVHEMENGFNIWSFNGKLLYRILKDH
FFQFLWRPRPPSFLSKEKEEEIAKNLKKYSKKYEAEDQDVSLLLSEQDREKRKKLKEEWE
AWISKWKRLHEEEKMEREKLRDGEASDEEEEYEAKEVEVEEILNVEEVVIPFEDSQQ
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtggtttctatggatgaaatcagagctatatctgagaggcttggtgtggat
cttgcaaaaatcaatctggactctattcatcttcctcctggtgatgatatggggataccc
agtgacgatgaagacttgttgaaggaggacgcgttggaggaggatcaaggttttggaaac
atactggtggtggataatcttccagttgtgcctaaagagaaatatgagaaattggaagga
gtagttcggaaaatttacagccaacttggtgttattaaggagggtggtctcaatatgcct
gttgatcctgtgactcagaaaacacttgggtactgctttatagagtataatactcctcag
gaagctgagctgagtaaggagaagacacacggatacaagttagataggtcacatatattt
gctgttaacatgtttgaagacattgagaagttcctgaaagttccagatgagtgggctcca
ccagagatcaagccttatgttccagtggagatgctgcaaaagtggcttactgatgacaaa
gctagagatcagtatgtgattcggtctggcggtgacacagaggtcctctggaatgatgca
agacaaatgaagcctgagcttgtttataaacgtccttattggactgagagttttgttcaa
tggtcccctatgggtacctacttggcaacagttcacagacaaggcgctgcaatttggggt
ggtgccaccactttcaaccgcctcatgcgctatgcacatcctcaggtaaagctgattgat
ttctcccctggtgagagatatctggtgacatatagcagccatgaaccaagtaaccctcgt
gacactcacagggttgtgctaaatatttttgatgtgagaactggaaaagtgatgagagat
ttcaagggaagtgctgatgaatttgcagttggaggaactggaggtgttactggtgtgtcc
tggccagtctttaggtggagtggtggtaaagaggataagtattttgcaagaataggaaag
aatgtcatctctgtttatgaaacagagactttctcacttattgacaagaaatctatcaag
gttgaaaatgttatggattttagctggtcaccaacagatccaattctttcactctttgtt
cctgaatgtggaaatcaacctgccagggtaagtcttgtgcaaatcccaagtaaagaggag
ttgaggcaaaagaatctcttcagtgtgagtgattgcaaaatgtattggcaaagcaatgga
gactaccttgctgtcaaagttgaccggtacacaaagaccaagaaaagcacatacactggt
tttgagcttttcagaatcaaagaacgggatattccaattgaggttttggagcttgacaac
aagaatgataaaattattgcatttgcttgggagcctaagggtcacagattcgctgtcatc
cacggtgacaaccccaggccagatgtcagtttctactctatgcggtctggcactaacacg
ggccgtgtttcaaagctgacaactctcaagggaaagcaggctaatgctctctactggtca
cctggaggccgcttcattattttagctggaatgaaaggtttcaatggacagttggaattc
tttgacgtcgatgagcttgataccatggcatctgctgagcattttatggcaacagatgtc
gaatgggatccaactggaaggtatgtagcgacagctgttacttcagttcatgagatggaa
aatggattcaacatctggtctttcaacggaaagctgctgtataggatactcaaggatcat
tttttccagtttttgtggcgccctaggccaccatccttcttaagtaaggagaaagaggaa
gagattgctaagaacttgaagaagtacagcaagaagtatgaagcagaggatcaggatgtt
tcattgctgttgagcgagcaagaccgtgagaagcgaaagaagctgaaagaagaatgggaa
gcatggattagtaagtggaagcggttgcatgaagaggagaaaatggagagggaaaagttg
cgtgatggggaagccagtgatgaagaggaggaatacgaggcgaaggaagttgaagtagag
gaaatactaaatgttgaggaggtggttattccttttgaagatagccaacagtga
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