KEGG   Solanum lycopersicum (tomato): 101267090
Entry
101267090         CDS       T02665                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sly03400]
    101267090
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    101267090
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 zf-P11 zf-Di19
Other DBs
NCBI-GeneID: 101267090
NCBI-ProteinID: XP_010313322
UniProt: A0A3Q7IYX3
LinkDB
Position
11:57987023..57996972
AA seq 1071 aa
MAGIKVTEELVSMVRSIVGDEYTEMDIIRSLHMAKNDPTAAINIIFDTPSFKKIEIRNTH
LNSEAGNVSSNSGKIKEAEISTHLNSEAGNVSSNSGKIKEDEISTVSLNEGLDSEREFGD
NGLVGKRAGRDMGSECGSNDLVGKRAGCQMGSEWWYVGCGEVAGMSTCKGRIVKPGDEVD
FTFPVEKKLSSPSPGKFGGGRGRQAAACSEIVRFSTKACGEIGRIPNEWARCILPLVRDK
KIRIEGCCKSVPNILGIMDSVLLSVRVHINSSMFRKSHQTSLKARSNPADDTVIHPLPTL
FHLLGLTPFKKAEFTPADLYTRKRPLNEQDSSIGPASILRANLSKSSSSADGNEVDNDES
ISDTDLDYIVGLADSSKLQEMEPPSTLQCELRPYQKQALHWMTQLERGRNTDEAATTLHP
CWNAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTISLLLSHS
ERGGSSGSQSTSQLSSENGEASNILGHSPTFVKKSAKVSSLDKLLKHKPKLISGGNLIIC
PMTLLGQWKAEIEAHAQPGALSVYVYYGQTRSKDAKVLARSDVVLTTYGVLASEFSAENA
EDSGGLLSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLEDIYSLL
RFLRVEPWGSWAWWNKLIQKPFEEGDERGLKLVQSILSLIMLRRTKSSTDREGRPILVLP
PADIQVIYCELTEAERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHP
FLVMSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSHAYIQEVVEELRNGEQGECPICL
EAFEDAVLTPCAHRLCRECLLASWRSSNSGLCPVCRNTVSRQELITAPSDNRFQVDVEKN
WVESSKVSALLSELKRLHSVGSKSIVFSQWTAFLDLLQIPLSRSSIPFVRLDGTLNQQQR
EKVIKKFSEEDDISVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQT
KQVMIKRFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggcggggatcaaagtcacggaggagcttgtttcaatggtgcgttcaattgttggcgat
gaatatacagagatggacataattagatcacttcacatggcgaaaaacgatcctacagct
gcaataaacatcattttcgacaccccgagttttaagaaaattgaaattcgcaatacccat
ttgaattcggaagctgggaatgttagtagtaatagtggtaagattaaggaagctgagatt
agtacccatttgaattcggaagctgggaatgttagtagtaatagtggtaagatcaaagaa
gatgagattagtacagtttctttgaatgaaggattggattctgaaagggaatttggggat
aatgggttggtgggtaagagggctggacgtgatatgggtagtgaatgtgggagtaatgat
ttggtgggtaagagagctgggtgtcaaatggggagtgaatggtggtatgtggggtgtggt
gaggttgctggtatgtcaacctgtaaagggaggattgtgaagcctggtgatgaagttgat
tttacgttcccagtggagaagaaattgagttcaccttcacctgggaagtttggaggtgga
cgagggcgtcaagcagctgcgtgttctgaaattgtaaggttttctacaaaggcttgtgga
gagattgggcgtattccaaatgaatgggctcgatgcattctgccgctggtgagggataag
aagattaggattgaagggtgttgcaaatcagtccctaatatattggggattatggactct
gttcttttgtctgtcagagtgcatattaacagttccatgtttcgtaaaagccatcagaca
tcactaaaggctagaagcaatcccgcagatgacacagttattcacccccttcccactttg
ttccatttgcttgggcttactcctttcaagaaggcagaatttactccagctgatttatac
acaaggaagcgacctttgaacgaacaggacagctccataggtcctgcctcaatattgcgt
gcaaacttatccaaaagctcctcatctgcagatggaaatgaagttgacaatgatgagtca
atttctgatactgatcttgactatattgttggtttagctgatagctcgaagctacaggaa
atggaaccaccaagtacgctccagtgcgaactgcgaccctatcagaagcaggcacttcat
tggatgacgcaactggagaggggaagaaacacggatgaagcagcaacaactctgcaccca
tgttggaatgcttaccgcctgaaggacgagagggagcttgttgtttacttgaatgcattt
tcgggtgatgcaaccactgaatttccgagtacccttgagatggctagaggaggaattttg
gcagattccatggggctagggaagactataatgactatatctctcctcctcagtcattct
gaaagaggtggatcatcaggaagccaatcgacaagtcagctgtccagtgaaaacggagaa
gctagtaatatcttaggtcattctccaacttttgtgaagaaatcagcaaaagtctctagt
cttgataagcttctgaaacacaagccgaaacttatctctggtggcaatctgattatatgt
ccaatgacactactaggtcaatggaaggcagagattgaagcccatgcacaacctggggct
ctatctgtttatgtttattatgggcagacaagatcaaaggatgcaaaagtgcttgctcga
agtgatgtcgtgctaacgacatatggggtattggcctccgaattttctgctgagaatgct
gaggacagtgggggccttctctctattagatggtttagagtggtgcttgatgaggcacat
actatcaaatcctccaaaagccaaatctcaaatgctgccgctgctcttattgctgaccgt
cggtggtgtcttactggtacccctatccagaacaatctggaggacatttacagtctacta
agatttttgagagtcgaaccatggggaagctgggcatggtggaacaagcttattcagaaa
ccttttgaggagggagatgagagggggctaaagttggttcaatcaatattaagtctgatt
atgttgagaagaacaaagtctagtacagatagggaaggaagaccaattttagttctacca
ccagcagatattcaagtgatatattgtgaacttacagaagcagagcgcgacttctatgat
gctttgtataaaagatccaaggtgaagtttgatcagtttgttgagcaaggacgggttctc
cacaactatgcttctatattggagttgcttttgcgacttcgtcaatgctgtgaccatccg
tttcttgtcatgagtcgaggtgatactcaagaattctctgatctaaataagcttgctaaa
cgtttcctcaagggtggtaaggagactggagaaggcaaggatgtcccttcacatgcttat
attcaagaggttgtggaagagttgcggaatggagaacagggtgaatgccctatttgtctt
gaagcttttgaagatgcggtgttgactccatgtgctcataggttatgtcgagagtgtctt
ttggcaagctggcgaagttctaattcaggcctctgtcctgtttgtagaaacactgtcagt
aggcaggagcttataacagcaccatcagacaaccgctttcaggttgatgttgaaaagaat
tgggtggagtcatcaaaagtatcagccttgttgtctgaattaaaacgtcttcattctgtt
ggctccaaaagcattgtttttagtcagtggactgccttcttagatctactgcagattcct
ctttctcgtagtagtattccatttgttcgccttgatgggacgttaaaccaacaacaacgt
gagaaagtaataaagaagttctcagaagaggatgacatatcggtgttgctaatgtcattg
aaggctggtggtgttgggataaacctgacggctgcatctaatgcttttgtcatggatcct
tggtggaatccagctgttgaggagcaagcagtcatgcgtgttcatcgtattggacaaact
aagcaagtaatgatcaaacgattcattgtgaagggttcagtagaggaaagaatggaggca
gtccaagctaggaagcaacgtatgatttctggtgctttgactgaccaagaagttcggact
gcaagaatcgaggaactcaagatgctttttgcatag

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