Solanum lycopersicum (tomato): 101267214
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Entry
101267214 CDS
T02665
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sly04990
]
101267214
Domain-containing proteins not elsewhere classified [BR:
sly04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101267214
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GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
KNTC1_N
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101267214
NCBI-ProteinID:
XP_004235762
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Position
3:complement(64643796..64650833)
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AA seq
609 aa
AA seq
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MADLKETYACIPSTERGRGILISGDTKSNSILYCNGRSVIIRYLDRPLQVAVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLMNFYEGPPFKF
KLSHREHSNFVNCLRFSPDGSKLISVSSDKKGIIYDAKTGDIIGELSSEGGHQGSIYAVS
WSPDSKQVLTVSADKSAKVWDISDDGKGKVKKTLASPGSGGVEDMLVGCLWQNDHLVTVS
LGGTISIFSASDLEKPPVSFSGHMKNVNSLAVLRSDPKIILSTSYDGLIVKWIQGIGYSG
KLDRKVTSQIKCFAVVEGELVSCAFDNKIWRVSLLGDQCGDANSIDVGTQPKDLSLALNS
PEVTLVSFETGVILLRGTKVLSTINLGFTVTASVISPDGTEAIVGGQDGKLHLYSIAGDS
LNEEVVLEKHRGAITIIRYSPDVSMFASADVNREAVVWDRASREVKLNNMLYHTARINCL
DWSPDNTMVATGSLDTCVIIYDVSKPASHRITIKGAHLGGVYGLAFTDERSIVSSGEDAC
VRVWGITPQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctcaaagaaacttacgcttgtataccttctaccgaacgaggtcgcggtatt
ctcatttcgggtgacaccaaatccaactctatcctttattgtaacggccgatccgttatt
atccggtatctcgatcgccccctccaagttgcagtttacggggagcatgcttatcaggct
acagtcgctcgttattctcctaatggtgaatggatcgcttctgctgatgtttcaggtact
gttcggatctgggggacccataatgacttcgttcttaagaaagagtttcgggtactatcg
ggtcggatcgatgaccttcaatggtctcctgatggaatgcgcattgttgcttgtggtgat
ggcaagggaaaatcacttgttcgtgccttcatgtgggactcaggaacaaatgtgggtgaa
tttgatggccattcaaggagagttttgagttgcgcttttaaacccacaagaccattccgc
atagccacttgcggcgaagacttcttgatgaacttttatgaaggaccaccatttaaattc
aagctgtctcacagggagcattcaaattttgtcaattgtttgaggttctctccagacgga
agcaaacttatcagtgtaagttcggacaagaagggcattatttatgatgccaaaacagga
gatataattggagagctatcatctgagggtggtcatcaaggaagtatatatgctgttagt
tggagtcccgatagtaaacaggtgctcacagtctctgctgataagtcagcaaaagtatgg
gatatatctgatgatggaaaagggaaagtgaagaaaacactggcttctcctggttctggt
ggagttgaggacatgctagttggctgtctctggcaaaatgaccatcttgttactgtttct
cttggtggaactatttccatattctcagcaagtgatctggaaaaacctcccgtgtcattt
tctgggcacatgaaaaatgttaattccttagctgtcctcagaagtgacccgaaaatcata
ttgtccaccagttatgatggtttgattgttaaatggattcaaggcattggatatagcggg
aaattagaccgaaaggtgacttctcaaatcaaatgctttgcagttgtggaaggagaactt
gtgtcatgtgcgttcgacaacaagatctggagagtatctctgcttggagatcaatgtgga
gatgcaaattctatagatgttggcacccaacctaaggacttaagccttgcccttaattct
cctgaagtgactttagtttcgtttgaaactggagtcattcttctccgtggtacaaaagtg
ctgtcaaccataaaccttggatttacggtgacggcatctgttatttcacctgatggaact
gaagcaatagtgggtggtcaggatggtaaacttcatttgtattccatcgcgggtgatagt
ctcaatgaagaggttgtccttgaaaaacacaggggagctattaccattattcggtactct
ccagatgtttccatgtttgcatcagcagatgtgaaccgagaagctgttgtctgggatcgt
gcatctcgtgaggttaaacttaataatatgttataccatactgcccgaataaattgcctg
gattggtcacctgataacacaatggtagctactggatccctagacacatgtgttataata
tatgacgtcagcaagccagcatcgcatagaatcactattaaaggagctcatttgggtgga
gtatatggactagcttttactgatgaacgcagtatagtgagttctggcgaggatgcttgt
gttcgtgtatggggaatcactccacagtaa
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