KEGG   Solanum lycopersicum (tomato): 101267214
Entry
101267214         CDS       T02665                                 
Name
(RefSeq) actin-interacting protein 1-2
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sly04990]
    101267214
Domain-containing proteins not elsewhere classified [BR:sly04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   101267214
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_NWD2_C KNTC1_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 101267214
NCBI-ProteinID: XP_004235762
LinkDB
Position
3:complement(64643796..64650833)
AA seq 609 aa
MADLKETYACIPSTERGRGILISGDTKSNSILYCNGRSVIIRYLDRPLQVAVYGEHAYQA
TVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIVACGD
GKGKSLVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLMNFYEGPPFKF
KLSHREHSNFVNCLRFSPDGSKLISVSSDKKGIIYDAKTGDIIGELSSEGGHQGSIYAVS
WSPDSKQVLTVSADKSAKVWDISDDGKGKVKKTLASPGSGGVEDMLVGCLWQNDHLVTVS
LGGTISIFSASDLEKPPVSFSGHMKNVNSLAVLRSDPKIILSTSYDGLIVKWIQGIGYSG
KLDRKVTSQIKCFAVVEGELVSCAFDNKIWRVSLLGDQCGDANSIDVGTQPKDLSLALNS
PEVTLVSFETGVILLRGTKVLSTINLGFTVTASVISPDGTEAIVGGQDGKLHLYSIAGDS
LNEEVVLEKHRGAITIIRYSPDVSMFASADVNREAVVWDRASREVKLNNMLYHTARINCL
DWSPDNTMVATGSLDTCVIIYDVSKPASHRITIKGAHLGGVYGLAFTDERSIVSSGEDAC
VRVWGITPQ
NT seq 1830 nt   +upstreamnt  +downstreamnt
atggctgacctcaaagaaacttacgcttgtataccttctaccgaacgaggtcgcggtatt
ctcatttcgggtgacaccaaatccaactctatcctttattgtaacggccgatccgttatt
atccggtatctcgatcgccccctccaagttgcagtttacggggagcatgcttatcaggct
acagtcgctcgttattctcctaatggtgaatggatcgcttctgctgatgtttcaggtact
gttcggatctgggggacccataatgacttcgttcttaagaaagagtttcgggtactatcg
ggtcggatcgatgaccttcaatggtctcctgatggaatgcgcattgttgcttgtggtgat
ggcaagggaaaatcacttgttcgtgccttcatgtgggactcaggaacaaatgtgggtgaa
tttgatggccattcaaggagagttttgagttgcgcttttaaacccacaagaccattccgc
atagccacttgcggcgaagacttcttgatgaacttttatgaaggaccaccatttaaattc
aagctgtctcacagggagcattcaaattttgtcaattgtttgaggttctctccagacgga
agcaaacttatcagtgtaagttcggacaagaagggcattatttatgatgccaaaacagga
gatataattggagagctatcatctgagggtggtcatcaaggaagtatatatgctgttagt
tggagtcccgatagtaaacaggtgctcacagtctctgctgataagtcagcaaaagtatgg
gatatatctgatgatggaaaagggaaagtgaagaaaacactggcttctcctggttctggt
ggagttgaggacatgctagttggctgtctctggcaaaatgaccatcttgttactgtttct
cttggtggaactatttccatattctcagcaagtgatctggaaaaacctcccgtgtcattt
tctgggcacatgaaaaatgttaattccttagctgtcctcagaagtgacccgaaaatcata
ttgtccaccagttatgatggtttgattgttaaatggattcaaggcattggatatagcggg
aaattagaccgaaaggtgacttctcaaatcaaatgctttgcagttgtggaaggagaactt
gtgtcatgtgcgttcgacaacaagatctggagagtatctctgcttggagatcaatgtgga
gatgcaaattctatagatgttggcacccaacctaaggacttaagccttgcccttaattct
cctgaagtgactttagtttcgtttgaaactggagtcattcttctccgtggtacaaaagtg
ctgtcaaccataaaccttggatttacggtgacggcatctgttatttcacctgatggaact
gaagcaatagtgggtggtcaggatggtaaacttcatttgtattccatcgcgggtgatagt
ctcaatgaagaggttgtccttgaaaaacacaggggagctattaccattattcggtactct
ccagatgtttccatgtttgcatcagcagatgtgaaccgagaagctgttgtctgggatcgt
gcatctcgtgaggttaaacttaataatatgttataccatactgcccgaataaattgcctg
gattggtcacctgataacacaatggtagctactggatccctagacacatgtgttataata
tatgacgtcagcaagccagcatcgcatagaatcactattaaaggagctcatttgggtgga
gtatatggactagcttttactgatgaacgcagtatagtgagttctggcgaggatgcttgt
gttcgtgtatggggaatcactccacagtaa

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