Solanum lycopersicum (tomato): 101267413
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Entry
101267413 CDS
T02665
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101267413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101267413
03036 Chromosome and associated proteins [BR:
sly03036
]
101267413
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
101267413
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
101267413
RSF complex
101267413
WICH complex
101267413
B-WICH complex
101267413
NORC complex
101267413
BRF complex
101267413
NuRF complex (fruit fly)
101267413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
Myb_DNA-binding
DEAD
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
101267413
NCBI-ProteinID:
XP_010322273
UniProt:
A0A3Q7GWV3
LinkDB
All DBs
Position
6:39906110..39916560
Genome browser
AA seq
1061 aa
AA seq
DB search
MGKPSRDRSSSEESVSESSEEEQVRGQVNDDEDEEELQAVARAAEDSDEEEDDDAPSDGA
DQEDEDNEEGVAVNEISKREKARLKEMQRMKKQKIQDMLDSQNAAIEADMNVKGQGRLKY
LLQQTELFAHFAKGEQSTAPKKTKGRGRHASKVTEEEEDEEYLKDEDELSGNTRLVAQPS
CIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHMV
VAPKSTLGNWMNEIKRFCPVLRAVKFLGNPDERRYIREELLVAGKFDVCVTSFEMVIKEK
SALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNFL
LPEIFSSAETFDEWFQISGETDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKV
GMSQMQKQYYKALLQKDLEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGE
HLVENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLLFRGHQYCRIDGNTGGE
DRDASIEAFNKPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRI
GQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGA
EMVFSAKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEKE
ENKVDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQSAPARPREPRIPRMPQLHDFQF
FNTQRLSELYEKEVRYLMTHQKNQVKDTIEMEESEDAGEPLTAEEQEEKEQLLEEGFSMW
SRRDFNTFIRACEKYGRDDLKSIAAEMEGKTEEEVERYAYVFKERYKELNDYDRIIKNIE
RGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGHG
NWDELKAAFRQSTLFKFDWFVKSRTTQELARRCDALIRLIERENQEYDERERQARKEKKH
AKNTTPSKRTLARQAAESPSALKKRKQLSMDDYVSSGKRRK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaccgtcgagagatagatcatcgtcggaggagtctgtatcggaaagttccgag
gaggagcaagttcgaggtcaggtcaatgacgacgaagatgaagaggaacttcaggccgtc
gcgagggccgctgaggactccgacgaagaggaagacgatgatgctcctagcgatggagcg
gaccaagaagatgaggataatgaggaaggggttgcagtcaatgaaatctcgaagcgcgaa
aaggccaggttgaaagagatgcagaggatgaagaagcagaaaatacaagacatgttggat
tcacagaatgctgccattgaagctgacatgaatgtcaagggacaggggcgattgaagtat
ctcttgcagcaaactgagttatttgcacattttgccaaaggtgaacagtccaccgctcca
aagaagactaaaggaaggggtcgtcatgcatcaaaggtaactgaagaggaagaagatgaa
gagtatctcaaagatgaagatgaactttctgggaatacacggctagtggcacaaccctcc
tgtattcaagggaagatgagggattatcaactggctggtttaaactggctgattcgactg
tatgagaatggaataaatggaatacttgctgatgaaatgggtcttggtaagacgttgcaa
accatctccttgatgggctacctacatgaatttagaggaataactggtcctcacatggtt
gttgctccaaaatccacgcttggcaattggatgaacgaaatcaaacgtttctgtcctgtt
ttacgtgctgttaagttccttggaaatcctgatgaaaggagatacatacgcgaggaacta
cttgttgcagggaagtttgatgtatgtgtcacaagctttgagatggttatcaaagagaag
tctgctctacgacgctttagttggcgttacatcataattgatgaggcacataggatcaag
aatgaaaattcacttctttcaaaaacaatgaggctctacaacactaattatagattgctt
atcacggggacaccgcttcagaataatcttcatgaactctgggcactgctgaactttctg
ctacctgagatctttagctcagctgagacttttgatgagtggttccagatttctggtgag
actgaccagcaggaagtggtccaacagcttcataaggtcctgcgtccatttcttcttagg
aggctgaagtctgatgtggagaaaggtctgcctcccaaaaaagaaaccattcttaaagtc
ggtatgtcccagatgcagaagcagtactacaaggctctgctgcagaaagatcttgaggtt
gtcaattctggaggggagcgcaagcgtcttctcaatatagcaatgcagctacgaaaatgc
tgtaaccatccatatctttttcaaggtgctgagccaggacccccatatacaacaggagag
catcttgtagaaaatgctgggaaaatggttcttctagacaagttgcttcctaaattaaag
gaacgtggctcaagggttttaatattttcacagatgacaaggctattggacatccttgaa
gactacttgttgttccgaggtcaccagtattgccggattgatggaaatactggtggtgag
gatcgtgatgcttctattgaggcttttaacaaaccagggagtgaaaaatttgccttctta
ttgtcaaccagagctggtggtcttggtatcaatcttgctacagcagatattgtcattctt
tatgatagtgactggaatccgcaggttgatttgcaggctcaggaccgggcccataggatt
ggacagaagaaggaagtccaagtgttccgcttctgcactgagtatactattgaggaaaag
gtgattgaaagggcttacaaaaagcttgcacttgatgcattggttatccagcaggggcgg
ctagctgaacaaaaaacggttaacaaggatgagctgctgcaaatggtgcggtttggtgct
gaaatggttttcagtgctaaagatagcaccattactgatgaggatatagatagaataata
gctaaaggagaagaggcaacagctgaacttgatgccaagatgaagaagtttacagaagat
gctatcaagtttaagatggatgacactgctgaattgtatgacttcgatgatgagaaggag
gaaaacaaggtggatttcaagaagattgtcagtgacaattggatagaacctcctaaaaga
gagagaaaacgcaattattcagagtccgaatacttcaagcaaaccatgcgtcaaagtgcc
cctgcaagacctagagagcctcggattcctcggatgccacagctgcatgactttcagttc
ttcaatacacagagactgagtgagttgtatgagaaggaagtgcgctatctcatgacacac
cagaagaatcaggttaaagacactatagagatggaagaatctgaagatgcaggagagcct
ttaacggctgaagagcaggaagaaaaggagcaacttttggaagagggattttcaatgtgg
agtagaagagacttcaatacttttatcagggcttgtgagaagtatggccgcgatgactta
aaaagtattgctgctgaaatggaagggaaaacagaggaggaggttgaaagatatgcttat
gttttcaaagaaagatacaaagaactaaatgattatgataggattattaagaacattgaa
agaggagaggctagaatttcgcggagagatgagattatgaaagcaattggtaagaagctg
gatcggtataaaaatccatggttggaattgaagatccagtatggtcagaacaaaggaaag
ctgtataacgaggagtgtgatcgtttcatgatatgtatggttcacaagcttggccatgga
aattgggatgagctgaaggctgcatttcgccaatcaaccttgttcaaatttgattggttt
gtgaagtctcgtaccactcaagaacttgccagaagatgtgatgcacttattcggttgatt
gagagggaaaatcaagaatatgatgagagggaaaggcaggcacgcaaagaaaagaagcat
gcgaagaacacgaccccatcaaagcgcactttggcaagacaggcagctgaaagcccttct
gctctgaagaagcggaagcaattgtcaatggatgactatgtcagctcaggaaagaggaga
aaatga
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integrated database retrieval system
