Solanum lycopersicum (tomato): 101267477
Help
Entry
101267477 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101267477
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101267477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
fn3_3
CBM-like
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
101267477
NCBI-ProteinID:
XP_069147635
LinkDB
All DBs
Position
11:4946533..4951528
Genome browser
AA seq
556 aa
AA seq
DB search
MGFKLQNKIVLYCFAIIFQFFLLVNGSRVHHHDNRNTSAKENSKLQQVSPPVTLTVTSRY
VVIDNGIVQLSLTNPTGSIFGVKYNGIDNLLEPLPETQRGLLASKFSVIAQDANKVEVSF
QKLYNPLNGNNPPLNIDKRFHFMAISDDRQRIMPTEEDRASGQTLDYREAVKITNPSNPR
LKNEVDDKYQYTDEIRNIKVHGWISDNPHMGFWVISPSYEYCNGGPMKQDLTSHVGPTSM
AIFFSGHYAGPQLGVSLTNGEAWTKVFGPVFFYVNSDSSNDHTILWEDAKRQMNEETNKW
PYDFPASKYYLHANQRGSVSGQLMVHDWYINVDVFPALNAYIGLAEPGLVGSWQSETKGY
QFWTQTDDSGNFKIKNVRPGIYGVYSWVPGVMGDYKFSSYITVTQGKVTNLGQIIFEVPR
NGPPLWEIGFPDRTANEFFIPDPLPGLQNYLYTNTTIHKFRQYGLWNRYTDLYPNGDLVY
KVGVSDFRKDWFFAHVNRRNKDKSFSATTWQIVFDVKNVDSSGTYHLHIALASASYAHLL
VWNLHLYSQYSTYFSL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaaattgcaaaacaaaatagttttgtattgctttgctattattttccaattt
ttcttgcttgtcaatggttcaagggtgcaccatcatgacaatcgcaatacttcagccaaa
gagaattccaaattgcaacaagtttctcctcccgtgacactaacggtcacaagtcgatac
gtggtaattgataatggcattgttcaactttctttaactaatcctactggttctattttt
ggagttaaatataatggtattgataatctccttgaacctttaccagaaacacaaagaggg
cttttagcatcaaaatttagtgtgatagcacaagatgctaacaaagttgaagtttctttc
caaaaattatataatcctttgaatggtaacaatcctcctctaaatattgacaaaaggttt
cattttatggcaatatcagacgatagacaaagaataatgccaacagaagaggatcgtgca
agtggtcaaacactagattatagagaagctgttaaaattacaaatccgtccaaccctaga
ctcaaaaatgaggttgatgacaagtaccaatatacagatgagattagaaatattaaagtt
catgggtggataagtgataatccacacatggggttttgggtaatttcaccaagttatgaa
tattgtaatggtggacctatgaagcaagatcttacctctcatgttggtccaacatctatg
gctatatttttcagtgggcattatgctgggccacaattaggagtttcattaacaaatgga
gaagcatggactaaagtttttgggcctgtatttttctatgttaattcagattcttccaat
gatcataccatactttgggaagatgctaaaagacagatgaatgaagaaacaaataaatgg
ccttatgactttcctgcatcaaaatattatcttcatgcaaatcagcgtggctcagttagt
ggtcaattaatggttcatgactggtatataaatgtagatgtttttcctgcattaaatgca
tatattggacttgctgagcctggacttgttggatcttggcaaagtgaaaccaagggttat
caattttggactcaaactgatgattctggtaatttcaaaattaaaaatgttagacctgga
atttatggtgtatattcttgggtccctggagttatgggagattacaaattctcttcttat
ataaccgttacgcaaggaaaggtcacaaacttaggtcaaattatatttgaagttccaaga
aatggtccaccactatgggaaattggatttccagatagaactgctaatgaattttttata
cctgatccattgcctggtcttcaaaattatttgtacactaacactactatacataagttt
agacaatatggtttatggaatcgttacactgatttataccctaatggagatttagtgtac
aaagttggtgttagtgattttagaaaagattggttttttgctcatgtaaataggagaaat
aaggacaagagtttttcagcaacaacatggcaaattgtgtttgatgttaaaaatgtggat
tctagtggaacttatcatcttcatatagctttggcttctgcatcttatgctcatttacta
gtatggaatcttcatctctactctcaatactcaacatattttagtttataa
DBGET
integrated database retrieval system
