Solanum lycopersicum (tomato): 101267505
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Entry
101267505 CDS
T02665
Symbol
TPG6
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101267505 (TPG6)
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101267505 (TPG6)
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101267505
NCBI-ProteinID:
NP_001307818
UniProt:
O22610
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Position
12:67731662..67733563
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AA seq
395 aa
AA seq
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MKINNPFSSILLISFFSIFFTKSIADVMFLNVINFGAKSDNKTDSSYAFLSAWDLACNSS
KSSTIYVPKGIFLVKQAYFKGKCNNNPIIFRIDGSIVAPFDYNVIGNEKNWILFQGVDGV
SIVGGNLDGQGSSLWTCKSSTKNCPRGATTLGFSNSNNVSITGLTSLNSQMFHIVINGCK
NVKLQGVKVYAPGESPNTDGIHVQLSSDISILNSIISTGDDCVSIGPGTSNLWIQNVACG
PGHGISIGSLAKDFEEAGVQNVTVKSVMFMNTQNGVRIKTWGRPSTGFVNNVLFQHVAMI
DVENPIVIDQNYCPYNKNCPGQVSGVKVSDVTYQDIHGSSATRVAMKFDCSKRNPCKGIK
LEDVNLSYKNEPAAEASCSNVAGTTTGVIQPTSCL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaacaaccccttttcttcaattcttctaatttcatttttttcaatttttttc
actaaatctatagctgatgttatgtttttaaatgttataaactttggtgcaaaatcagat
aacaaaactgactcatcatatgcatttttatctgcttgggacttagcttgtaactcttca
aaatcatcaacaatttatgtaccaaaagggatttttttagttaaacaagcatattttaaa
ggaaaatgcaacaataatcccataatttttcgtatcgatggttcaatcgtagcgcctttc
gattataatgtgattggaaatgaaaaaaattggattttatttcaaggtgttgatggtgtt
tcaattgttggtggtaatcttgatggtcaaggatctagtttatggacttgcaaaagttct
accaagaactgccctagaggggctacgactctgggattttctaactctaacaatgtatcg
ataacggggttaacttcattgaacagccaaatgtttcatattgtcatcaatggttgcaaa
aatgtgaagttgcagggtgttaaggtttatgccccgggtgaaagccccaacactgatgga
attcatgttcaattatcgtctgatatctcaatattgaactcaataatcagtactggagat
gattgcgtatccattggtccaggaactagtaatttgtggatccaaaatgtcgcgtgtggc
cctggccatggaattagcattggaagcttagcgaaggattttgaagaggcaggggtgcaa
aatgtgacagtaaaatcagttatgtttatgaacacacaaaatggtgtgaggatcaaaaca
tggggaagaccaagtactggatttgtcaacaatgtactgttccagcacgttgcgatgatt
gatgttgaaaatccaattgttatcgatcaaaattactgtccgtataacaagaattgtcca
ggacaagtctcgggcgtgaaagtaagtgatgttacgtatcaagatatacatggtagctca
gcaacacgagtcgcgatgaagtttgattgcagtaagagaaatccatgtaaaggaataaaa
ctggaagatgttaatctgagttataagaatgaaccagctgctgaagcttcatgttctaat
gttgcaggaacaactactggtgtaattcaacctactagttgtttgtaa
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