Solanum lycopersicum (tomato): 101267609
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Entry
101267609 CDS
T02665
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1 isoform X1
KO
K03255
protein TIF31
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sly03012
]
101267609
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101267609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_1
TPR_8
Motif
Other DBs
NCBI-GeneID:
101267609
NCBI-ProteinID:
XP_010321501
LinkDB
All DBs
Position
5:complement(63993793..64012406)
Genome browser
AA seq
1866 aa
AA seq
DB search
MAPNKNGRGKTKGDKKKKEEKVIPVAMDITVNLKDETHIILKGISTDRIIDVRRLLSVNT
ATCNITNFSLSHEVRGPRLKDTVDISALKPCVLTLIEEDYDEESATSHVKRLLDIVACTT
CFGPSVRDSGGNSEATNESKSVKKSSKQRRNGKDKRSPSPPEGAAATVTAMVVDEDGEMS
NSCPKLGSFYEFFSLSHLTPPLQFIRRETRKVDEVLPNDYLFSLEVKLFNGKLVSVEACR
KGFHNTGKHGILCHNLVDLLRQLSRAFDNMIPLFQAYNELMKGFLERNKFGNLPYGLRAN
TWLVPPVAAQMPSIFPSLPVEDEKWGGNGGGLGRDGKSDLLPYASELLFIAYMPCKTTEE
RQVRDRRAFLLHSLFVDVAISRAISAVRHVMEKVKPAHSDANREIIYNERVGDLSIFVTK
DVADGSCKIDTKIDGCQTTGIAKKNLIERHLLKGITADENTAAHDIASLGVLNVRHCGYI
ATVKVQGKESDKVGFPSESIELADQPDGGANALNINSLRYLLHAKDDNKVMHSKPSKSEE
ISSSRAFVKRILKESLIKLQEQNIEGDSFIRWELGACWIQHLRDLKKSEKDKKPHTMKTK
DEIKVEGLGIHLKSLKNRKQNEPQSESFKPVADSVDGRSEEDVIPSEDSQRETDANQNQL
ILKSLLSDDGFTRLKESETGLHVKSVEELIDMSQKYYNEVALPKLVADFGSLELSPVDGR
TLTDFMHTRGLRMRSLGHIIKLSDKLSHVQSLCIHEMIIRAFKHILQAVIASVVEIEDLA
AVIAATLNMMLGFPENDEQNEPHGIDPLVWRWLELFLKNRYEWETGILNYKDVRKITILR
GLCLKVGIELVPRDYDVNSPNPFRKEDIVSLVPVHKQAVCSSADGRQLLESSKTALDKGK
LEDAVSYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATVYQQKALDINERE
LGLDHPDTMKSYGDLAVFYYRLQHTELALNYVKRALYQLHLTCGPSHPNTAATYINVAMM
EEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYALSVQHEQTTL
QILKKKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDY
INPGSDAKGRNAMLAKRKGFASKVKGKSDQTNCASANSVTPKDVLEVKQDDQKLICKDDN
DSQKNEEPFDIVVMSNLNADRRISENNKPIEPRPLVKDTSLEKCVNGAVLSEPYAEAGDG
WQPVQKPRSAGIYGQKLRQRWQTISKVTDFQNEDSISKVGHARLKNNYQAGRYFVLKKKT
SDGNNADYYVAKGPSPSTKLGRRVAKAVMYRVKSVTSSVRDVVALTSNTGGELLSSSVEQ
IQVCAVKEAGPMPKRSSIVSLGISPSYKDVAVAPPGTIYMLQKSFSQDEVPDSPKVLELG
EEANGEEQNFELMKSNAESIKLGDVQHLIADDAGNINDETVATDNKEGISLSYLGGGEIS
DVTCPVMPSVQSSHVDVSPMEEEGLNTRNMCISDNFDSNGNSNVTLQEMEYPEVKASVSY
SSDISRDMSNKQLSASAAPFSPFPAVARIVPLPMNINHPSGPGRLPPVGLWPMNMSVHPG
TPTILPNPMCSSPHHSYHSPPPTPNMMNCLPFMYPPYSQPQMLPPTTFPVNSSAFHPNHY
AWQCNMTPKASDYVPGSVWSGCHPIEFSVSLPVVEPITESTLVSVTKESSDNSERSSPVP
SFPVDLISGDEVKAEANLPAPDAVEILNDIAEVGSEKVRAMNTLASEYITLSDNQSQKGD
APNENAGSCDNYIQRHPCKTDDEKTFNILIRGRRNRKQILRMPMSLLKRPYTSQPFKAVC
CRVIRD
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaacaagaatggtcgtggcaagacaaaaggagacaagaagaagaaggaagaa
aaagttattcccgttgctatggatataacagtaaatctaaaggatgagactcatattatt
ctaaagggaatatcaacggatagaataatcgatgttcgtcgattattatcagtgaacaca
gcaacgtgtaatatcaccaatttttcattatctcatgaggtaaggggcccacgtttaaag
gacacggtggacatttccgccttgaagccatgcgtcctcacactcatagaagaggactac
gacgaagagagcgcgacgagtcacgttaaacgattgctggatatcgtcgcctgtacgacg
tgttttgggccgtctgttagagattccggcgggaattctgaagctacaaatgaatcgaag
agcgttaagaaatcgagtaagcagcggagaaatggaaaggataagcgatctccttcaccg
ccggagggtgcggcggcgacggtgacggcgatggtggtggatgaagacggagaaatgagt
aattcctgcccgaagcttggtagcttctacgaattcttctcactttctcatctcacacca
cctcttcagtttataagaagggaaacaagaaaggttgatgaagttctaccaaatgattat
cttttctcacttgaagtgaaactcttcaacgggaagttggtttcggttgaagcttgcaga
aaaggttttcataacactggaaagcatgggatactttgtcacaatcttgtagatttgttg
agacaactaagcagagcatttgacaatatgattcctctttttcaggcctacaatgaactc
atgaaaggatttctggagcgtaacaagtttgggaatcttccttatggtctcagagccaac
acatggcttgttccccccgtggctgcacagatgccgtcaatctttccttctctgcctgtg
gaggatgaaaagtggggaggaaatggaggtggtctaggccgagatggaaaaagtgattta
ttaccttatgcaagtgaacttttgtttattgcatatatgccttgtaagacaacagaggag
aggcaggttcgagatagaagggcttttcttcttcatagtttatttgttgatgttgcaatt
tctcgggccatctcagctgtgcgacatgtaatggagaaagttaaaccagctcattctgat
gcaaacagagaaatcatttataatgagagagttggggacttgagcatatttgtcaccaaa
gatgtggcggatggtagctgcaaaatcgataccaaaattgatggatgtcaaacaactgga
atagctaagaaaaatctgattgaaaggcatctactcaaggggattactgctgatgaaaat
actgctgcccatgatattgccagtttaggtgttttgaatgtaaggcattgtggttatatt
gcgactgtaaaagttcaagggaaagagagtgacaaagtgggatttccatcggaaagcatt
gaacttgctgatcagcctgatggtggtgcaaatgcgcttaatatcaacagtttaaggtat
ttgcttcatgcgaaagatgacaacaaggtaatgcattcaaaaccctcaaaatctgaagag
atcagttcctctcgggcatttgtgaagagaatcctaaaagagagtcttatcaagcttcaa
gaacagaatatagaaggtgactcttttatcagatgggaacttggagcttgctggatacaa
cacttacgggatctaaagaaatcagagaaagataaaaaacctcatacaatgaagacaaaa
gatgagatcaaggttgagggacttggaatacatctgaaatcccttaagaacagaaagcag
aacgaaccccagtctgaaagcttcaaacctgtggcagatagtgtagatgggagatcagaa
gaagatgtcattccatcagaggattctcaacgtgagactgatgccaatcaaaatcagctc
atactgaagtcattgctgtcggatgatggttttactcgtctgaaagagtcggagaccgga
cttcacgttaagtctgtggaagagctgattgatatgtcacagaagtactacaatgaagtt
gcccttccaaaactggttgcagattttggatctctggaactctcaccagttgatggtcga
accttaactgatttcatgcataccagaggtctgcgaatgcgttctcttggacacattata
aaactttcagacaaattatctcatgtgcaatctctatgtatacacgagatgataatacga
gcttttaagcatattctgcaagctgttattgcttcggtcgttgagatagaagatctggct
gcagtaattgctgctacattaaacatgatgcttgggtttcctgaaaatgatgaacaaaat
gaaccccatggcatagacccacttgtgtggagatggctggagttatttttgaagaatcga
tatgaatgggagactggcattttaaattacaaggatgtgaggaaaatcacaattcttcgc
ggtttatgccttaaggtgggaatcgaacttgttccgagagattatgatgtgaattctcca
aatccttttagaaaggaagacattgtcagcctagtacctgtgcataagcaagctgtttgc
tcttctgcagatggacgacagcttttggaatcatcaaagacggctctggataagggtaaa
ctcgaagatgctgtcagctatgggactaaggctcttgctaagcttgttgcagtatgtggt
ccctaccatagaatgacagctggagcatatagccttttagctgttgttttgtatcacacc
ggtgattttaatcaggcaactgtctatcagcagaaagccctggacatcaatgaaagagag
ttagggcttgatcacccagataccatgaaaagttacggggatcttgcagttttctattac
cgacttcaacacacagagttggctctcaattatgtaaagcgagctctttatcaattgcat
ctcacatgtggcccctcacatccaaacactgccgcaacatacataaatgtggctatgatg
gaagaagggcttggtaatgtgcatgttgccctcagatatctccataaagctctgaagtgc
aatcaaaggttactcgggcctgaccatattcagactgctgcgagttaccatgctatagca
attgctctctctttgatggaagcttatgctttgagtgttcaacatgagcaaacaaccttg
cagatactcaaaaagaagcttggtccagatgaccttcgcacacaggatgctgctgcttgg
cttgagtatttcgagtccaaggcttttgaacagcaagaagctgctcgaaatgggactagg
aagccagatgcatcaatagccagcaagggccatttaagtgtgtcggatttgctcgactat
atcaatcctggttctgatgccaaagggagaaatgctatgttagcaaaaagaaaaggcttt
gcctcaaaggtaaagggaaaatctgatcagaccaattgtgcctcagcaaactctgtcact
cctaaagatgtcctggaagtgaagcaagatgatcagaaactaatttgcaaagatgataat
gattcccagaagaatgaggaaccctttgacatagtagttatgtctaatctgaatgcagac
cgaagaatttcagagaacaacaaacccattgaacctagacccttggtgaaagacacttcg
ttggagaagtgtgttaatggcgctgtcttatctgaaccttatgcagaagcaggtgatgga
tggcagccagtacagaaaccaagatcagctggtatttatggccaaaaactaagacagagg
tggcaaaccatcagcaaggtcactgattttcagaatgaagactcaatttctaaagttggc
catgctagattgaagaataactatcaagctggtagatattttgtcttaaagaaaaagaca
tcagatggaaataatgcagattattatgtagcaaagggtccatctcccagtaccaaactt
ggtcgaagagttgccaaagctgtcatgtatcgggtcaagtccgtgacatcgtctgtcaga
gatgttgttgctttgacctctaataccggaggtgagttattaagttcttcagtggagcag
attcaagtctgtgcagtaaaagaggctggaccaatgccaaagaggagttccatagtaagc
ttaggaatatctccttcctacaaggatgtagcagttgccccaccaggtaccatctatatg
ttgcagaagagcttttctcaagacgaagttcctgatagtccaaaagttctggaacttgga
gaagaagccaatggagaggaacaaaattttgagctaatgaaaagtaatgcagaatccatc
aagctgggggacgttcagcatcttattgcagatgatgctggtaatataaatgatgaaaca
gtagctactgacaacaaagaaggaatttctttgagttatttgggaggaggtgaaatttca
gatgtcacatgtccagtcatgccttcagttcaatccagccatgttgatgttagtccaatg
gaagaggaaggtctcaacactcgcaacatgtgtatttctgacaattttgattcaaatggt
aattcaaatgttacgttacaagagatggagtacccagaggtaaaagcttcagtatcttat
tcaagtgatattagtcgagatatgtccaataaacagttatctgcatcagcggcacccttc
agcccattcccagccgttgctcgtatagtgccactgcctatgaacattaatcacccttct
ggtcctggaagactaccaccagtaggtctttggccaatgaatatgagtgttcatccagga
acacccactattttgcccaacccaatgtgctcctcccctcatcactcatatcattcacct
ccgcccaccccaaacatgatgaactgtttgccctttatgtaccctccctattctcaaccc
cagatgttacctccaactacattcccagtaaacagcagcgctttccatcccaatcattat
gcttggcagtgcaatatgactcctaaagcatcagattatgttcctggctcagtttggtct
ggctgccatccaatagagttttctgtctcgctacctgtggttgaaccaattactgagtca
actttggtttcggtcacaaaagagtcatctgataattctgagcgctcgagtccggtacca
agctttcctgttgatctcatctctggggatgaggttaaggcagaagcaaatcttccagca
ccagatgccgtggaaattttgaatgatatagctgaggttggatcagaaaaagtgagagca
atgaacacattggcttcagagtacattaccttgtcggacaatcaatcacagaagggtgac
gctccaaatgagaatgctggatcctgtgataattacatacagagacacccttgtaagact
gatgatgagaagactttcaacattttaataagaggtaggaggaaccgcaaacaaattctg
agaatgccgatgagtttgcttaagagaccatatacttctcagcccttcaaagctgtatgt
tgcagggtaataagagactga
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