Solanum lycopersicum (tomato): 101267706
Help
Entry
101267706 CDS
T02665
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X2
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00730
Thiamine metabolism
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
101267706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101267706
Enzymes [BR:
sly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
101267706
Ribosome biogenesis [BR:
sly03009
]
Prokaryotic type
GTPases
101267706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_29
nSTAND1
AAA_23
AAA_16
AAA_21
AAA_22
IstB_IS21
SMC_N
Adeno_IVa2
AAA_28
IIGP
Guanylate_kin
AAA_15
Roc
Motif
Other DBs
NCBI-GeneID:
101267706
NCBI-ProteinID:
XP_004239207
UniProt:
A0A3Q7GDU0
LinkDB
All DBs
Position
5:10715132..10719728
Genome browser
AA seq
487 aa
AA seq
DB search
MKIASFSLLRLPFTVSATRHRFFSAFIVAAGRHQNPNNVSRKLQQPNKNLLKARETINKH
FSTLAPILSLEEKPQLSHDQAVGTVASSQANFMRVIVQHIPPETSVDPSGSFSKGSGEIG
VELLCVVKAVLKKIKRRVLVGDKVLVGSIDWVDRRGAIENVFQRTTEILDPPVANVDHLL
VLFSMDQPKIEPFSLTRFLVEAESTGIPLTLALNKSELVSQEEIKAWKSRLRSWAYEPIF
CSVDSKRGLDTLQFIMREQTSVIVGPSGVGKSSLINALRDNKHILGAVEEKNWFDPILGS
KWYEEQRVGEVSVRSGRGKHTTRHVSLLPLPDGGYLADTPGFNQPSLIKVTKNSLAHHFP
EIRKVLKDSEPAKCAFNNCLHLGEPGCLIKGDWERYPYYLQLLDEIKIREEFQLRTIGTK
RESDVRCKVGDKGVVQAEPRLEPKKYRRQSRKRVNQSLLDELDELDDEDDTLEDDNPILR
ALREENK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgcttcgttttcacttcttcggcttcctttcaccgtttccgccactcgccac
cgcttcttctccgccttcatcgtcgccgccggccgtcaccaaaaccctaacaatgtctca
aggaagctccaacaaccgaacaaaaatctactcaaagctcgtgaaactatcaataaacat
ttctctactctggcacctattctttctctggaagaaaagcctcaactctctcacgaccaa
gccgtaggaactgtagcctcttcacaagcgaatttcatgcgcgttatagtccaacatatt
cctccagaaacttctgtggatccttctggaagcttcagtaagggttcgggggaaattgga
gttgagttgttgtgtgtggtcaaggctgtattgaagaagattaagaggagagttttggtt
ggggataaggttttggtaggttctattgattgggtggatagacgcggcgctattgagaat
gtgtttcagaggacgacagagattttggatcctcctgtagctaatgtggatcatttgcta
gtgttgttctctatggatcagccaaaaattgagccattctcactcactaggttcctcgta
gaagctgaatcaaccggaattcctcttactcttgccttgaataaatcagaacttgtttct
caagaggaaataaaagcatggaaatctaggcttcgtagttgggcctatgaaccaatcttt
tgcagcgttgattccaagcgtggacttgatacactccagtttattatgagagaacaaaca
tctgtcattgttggtccaagtggtgtgggaaaatccagcctgatcaatgctttaagagac
aataaacacattcttggtgcagtcgaagagaaaaactggtttgatcctattctagggagc
aagtggtatgaagagcagcgtgtgggggaagtgtcagtaagaagtggcagaggaaagcat
acgacgaggcacgtgtctttgcttccattgcctgatggggggtatcttgctgatacgcca
ggatttaaccagcctagtttgattaaagtgacaaagaattctcttgcacatcattttccg
gagatccgcaaagtgcttaaagatagtgaacctgcaaagtgtgcattcaataattgcttg
catcttggtgaaccgggctgccttataaaaggtgattgggaaagatacccatattatctt
cagttgcttgacgaaattaagatcagggaggagtttcagttgaggaccattggaactaaa
cgagaaagtgatgttaggtgcaaagtaggagacaagggagttgtgcaagcagaaccgcgg
ctagagcccaagaaatataggcgacaatctcgtaaaagagtgaaccagtcattactagat
gaattggatgaactcgacgatgaagacgatacactagaggatgacaatcctattctaaga
gcattgagggaagaaaataaatag
DBGET
integrated database retrieval system
