Solanum lycopersicum (tomato): 101267716
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Entry
101267716 CDS
T02665
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101267716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101267716
Ion channels [BR:
sly04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101267716
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
101267716
NCBI-ProteinID:
XP_004242592
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Position
7:2075353..2082732
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AA seq
735 aa
AA seq
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MFDCGSKSQYVGGQREKFVRLDDLDSRLSSPSASLTTNTCGFNIEGLKRSSHATSSPSRS
FKRGVKKGSEGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVVSCIL
AVSVDPLFFYLPVFDNKSNCLQIDRKLAVIATTLRTVIDAFYLIHMALQFRTAYIAPSSR
VFGRGELVIDPAQIAKRYLRFYFIIDFLAVLPLPQIVVWRFLKSSTGSDVFTTKQALLYI
ILLQYIPRFARVVPLTSELKRTTGVFAETAWAGAASYLLLYMLASHIVGSFWYLLAVERY
DTCWQQACKHNATCNTDFLYCGNQYMTGYNRWSSISESVLNNACPADSDNSPFDFGIFDQ
ALSSGIIYSMKFVAKYCYCLWWGLQNLSTLGQGLQTSTYPGESIFSIGLAILGLILFALL
IGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYKWQETRGVDEEN
IVQSLPKDLRRDIKRHLCLALVKRVPLFENMDERLLDAICERLKPCLYIENTHIVREGDP
VDEMLFIIRGRLESVTTDGGRSGFFNRSLLKDSDFCGEELLTWALDPKSGSNLPSSTRTV
KALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWGACFIQAAWRRYTKR
KLMELQRKEEEEAEALAAGSGSSGGPTYSIRATFLASKFAANALRGVHRNRNLKSARELV
KLQKPPEPDFSADAD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgtggttccaagtcccaatatgttgggggccagcgagagaagtttgtaagg
ttggatgacttggattctagactatcctctccttctgcatcactaacaacaaatacatgt
ggcttcaatattgagggtttaaaacgttcaagccatgcgactagcagtccgtcaaggtct
ttcaagagaggagtgaaaaaaggatccgaaggacttaaatcaattggtcgatcactggga
tttggtgtctctcgggctgtatttccggaagatctgaaagtttcagagaagaagattttt
gaccctcaagataaattccttctgttatggaacaaactgtttgttgtatcatgtattcta
gccgtgtctgtggacccactgtttttctaccttccagtttttgataacaagtcaaattgc
cttcagatcgataggaagctagctgtcatagccactaccctacgtacagtgattgatgct
ttctatcttattcacatggctcttcagttccgcacagcttatattgcaccttcatctcga
gtttttggacggggtgaacttgtgatagatcctgcacagattgctaaaagatacttgcga
ttctattttatcatcgattttcttgctgtgcttcccttgccgcagattgtggtctggaga
ttcctgaagagctcaacaggttctgatgtcttcactacaaagcaagctttgctttacatc
atcttacttcagtacatccccagatttgccagagttgtacccttaacttcggaattgaaa
agaactactggtgtctttgctgaaaccgcatgggctggtgcggcgtcctatttgctattg
tatatgcttgctagtcatatagttgggtctttttggtacttgctagctgtggaacgctat
gatacatgctggcagcaagcttgtaaacacaatgcaacgtgcaacactgatttcttgtac
tgtgggaatcagtacatgacgggttataatagatggagcagcataagtgaatcagtttta
aacaatgcttgccctgcagatagtgacaactcaccatttgatttcgggatttttgatcag
gctttatcgtctggcatcatttattccatgaaattcgtggctaaatattgttattgtctg
tggtgggggctgcagaacttaagtaccctcggacagggacttcaaactagcacatatccc
ggggagtctattttctctataggattggctatacttgggctcattctctttgcattattg
attggtaacatgcagacgtatctacaatctcttaccattcgactagaagagatgagagtt
aaaaggcgtgactcagaacagtggatgcatcatcggttactcccacaagatctccgggaa
cgggttaggcgctatgatcagtataagtggcaggaaacacgtggagtggatgaagagaat
atagtccagagcttgcccaaggatcttaggagggatatcaaacgtcatctttgtctggct
ttagtgaagagggttcctctatttgagaatatggatgaaaggttacttgatgctatttgc
gagcgtctgaaaccatgtttatatatcgagaacactcacattgttcgagaaggagatccg
gtggatgaaatgctcttcatcattcgcggccgccttgagagtgtgacaactgatggtggt
agaagtggtttcttcaaccgtagtttgttgaaagacagcgacttctgtggagaggaactt
ctaacctgggcactggatccaaaatctggctctaacctcccatcttccactcgtacggtg
aaagctcttacagaagtggaggctttcgctcttacagcagatgagttgaaattcgttgcc
agtcagttcagacgtcttcacagtaggcaagttcagcacacattccgtttctactcacaa
caatggcggacttggggtgcttgctttatccaagcagcgtggaggcggtacacaaagaga
aaacttatggagctccaacggaaggaagaagaagaagccgaggcattagctgcaggtagt
ggtagttccggtggcccgacttacagtattcgtgcaacgttcttggcatcgaagtttgca
gcaaatgccctccgaggcgttcataggaatcggaatctcaagagtgctagggagctggtg
aaactacagaagcctccagaaccagattttagtgcagatgcagattga
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