Solanum lycopersicum (tomato): 101267743
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Entry
101267743 CDS
T02665
Name
(RefSeq) YTH domain-containing protein ECT1 isoform X2
KO
K20102
YTH domain-containing family protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101267743
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101267743
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Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
101267743
NCBI-ProteinID:
XP_004230452
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Position
1:88130549..88136921
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AA seq
563 aa
AA seq
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MAAEAVAPGLKSDPSNKLIEKDLVSKKDGKAADSVASLGAVTSIKCENDQPPAAEQGAYY
PPTSYCDYYYPGYNGTYNQLDEQAYFNAGVQSDNGSLLYYMPGYNPYSAGFVGGDGKQPY
PSSGYLQQPVSYGSDSMPCYTWGSPYCADITNSAAPKSGNVKSTFGRNGSVKSNGFNSTK
TNSSFSSKNSTVLFNPKSRPATAMSNPPKSFHQAQPFNPVNKFQSDVQSGGLMKGFHLVG
DYPSYTSQNQGFFMPYDPINCQTNSRMWNGNYRAKPRGNFTRNGVFEATNELPRGPRANG
RSVPSKPSAEEDQLVPAVQREKYNKEDFKTQYDNAKFYIIKSYSEDDIHKCVKYDVWSST
PNGNKKLDTAFVESEAKASGTGSSCPVFLFFSVNGSGQFLGVAEMVGQVDFNRNMDFWQL
DKWSGFFPLKWHIVKDVPNTQFRHIILENNDNRPVTYSRDTQEIGLKEGLEMLNILKNYS
EKTSILDDFNFYEKREKVLKAKRSSKPVIQADAYEKADSLKQFKGGDKVLEEELKTNSTD
PTAPLVSLTKNLSINSRPFKSSV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgaagctgttgctccgggactgaaatctgatccctctaacaaactgattgag
aaggatttggtttcaaaaaaagatggaaaagctgctgactcggtggcttctttgggagct
gtgaccagcatcaagtgtgaaaatgatcaaccacctgctgcagagcaaggtgcttattat
ccacctactagctattgcgattactactatccaggatataatgggacttataatcagtta
gatgagcaggcttactttaatgcgggtgttcaatcagacaatggttcccttctctactat
atgcctggctataatccttacagtgctggatttgtgggaggcgatgggaagcagccctat
ccttcgtccggatatctccagcaacctgtctcatatggttcagattccatgccatgttat
acatggggctcgccatactgtgctgatatcaccaatagtgctgctccaaaatccgggaac
gttaaatcaacttttggacgaaatggttcagtcaagtcgaatggttttaattccacaaaa
acaaatagttctttctcaagcaaaaactcgaccgtactctttaacccaaagagtcgacca
gctactgccatgtcaaatcctccaaagtctttccatcaagctcagccttttaatccagtg
aacaagtttcagtccgatgtccagtctggaggcctgatgaaggggtttcatctggttggg
gactacccatcatacacgagtcagaatcaaggttttttcatgccttatgatcccatcaac
tgtcaaacaaacagtagaatgtggaatggaaactacagagctaaaccacggggaaatttc
accagaaatggtgtgtttgaggcaactaatgagttacctcgtggtccccgtgccaacggt
agaagtgtcccttcaaaaccatctgctgaggaggatcagcttgtgccagctgttcagagg
gagaagtataacaaggaggattttaagactcagtatgacaatgcaaaattttacattatc
aagtcatacagtgaagatgatatccacaagtgtgtcaaatatgatgtgtggtcaagtact
ccaaatggaaacaagaaattggacactgcctttgttgaatctgaggctaaagcaagtgga
actggttcaagctgtccagtgttcctcttcttttctgtaaatggaagtggacagttttta
ggtgtagctgagatggttgggcaggttgacttcaacagaaacatggacttttggcagctt
gataagtggagtgggttcttcccactgaagtggcacatagttaaagatgtaccaaataca
cagttcaggcacatcatccttgaaaacaatgataatagacctgtaacctatagcagagat
acacaggagattggattgaaggaaggtttggaaatgcttaacatacttaagaattactca
gagaagacatctatattggatgatttcaatttctatgagaagcgtgagaaagtgctcaag
gctaaaaggagttcaaaaccagttattcaagctgatgcatacgagaaagctgattctctt
aagcaattcaaaggaggagacaaggtactcgaggaggagctgaagaccaactctactgat
ccaactgcacctttggtttctctcaccaaaaacctatcgattaattcaaggccattcaaa
agtagtgtctga
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