Solanum lycopersicum (tomato): 101267921
Help
Entry
101267921 CDS
T02665
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00061
Fatty acid biosynthesis
sly00620
Pyruvate metabolism
sly00640
Propanoate metabolism
sly01100
Metabolic pathways
sly01110
Biosynthesis of secondary metabolites
sly01200
Carbon metabolism
sly01212
Fatty acid metabolism
Module
sly_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
101267921
00640 Propanoate metabolism
101267921
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101267921
Enzymes [BR:
sly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
101267921
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
101267921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
101267921
NCBI-ProteinID:
XP_004228525
LinkDB
All DBs
Position
1:2762590..2775557
Genome browser
AA seq
536 aa
AA seq
DB search
MDSAAMTSVCGKSALCSTPGLFLGRTSGIRSSQCSFIAGNRINFPRQTAQAHRVRTNSRK
GHGALTVTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCI
GEAPSNQSYLVIPNVLSAAISRGCTMLHPGYGFLSENASFVEMCREHGINFIGPNPDSIR
VMGDKATARDTMKNAGVPTVPGSDGLLQSTEEGVKLAEEIGYPVMIKATAGGGGRGMRLA
KEPNEFVKLLQQAKSEAAAAFGNDGVYLEKYIVNPRHIEFQVLADKYGNVVHFGERDCSI
QRRNQKLLEEAPSPALTAELRKAMGDAAVAAAASIGYIGVGTIEFLLDERGSFYFMEMNT
RIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKNFRPG
PGRITSYLPAGGPFTRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALDDTV
ITGVPTTIEYHKLILDIEDFKNGKVDTAFIPKHEEELAPPQQIVPAASKELINANA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcagccatgactagcgtttgtggcaaatctgctctttgctctactcccggt
ttatttttggggagaacgagcggtattaggagctcgcagtgtagctttatagctggaaat
aggataaactttccaaggcagacagctcaagcacacagagttcgtactaattctcgcaag
ggtcatggtgctcttactgtgacatgccgcgccgagaaaattttggtggcaaatagagga
gagattgctgttcgcgtgatccgaactgcccatgagatgggaattccttgtgttgcggtt
tattcgaccattgataaagatgccttacatgtgaagctagctgatgaatctgtttgcatt
ggagaagcaccaagtaatcagtcgtatttagtgatcccaaatgtcttgtctgctgctatc
agtcgcggatgtacaatgttgcatcctggatatggtttcctttctgagaatgcaagtttt
gttgagatgtgcagagaacatggaatcaactttattgggccaaatccagacagtataaga
gtcatgggtgacaaagccactgctagagatacaatgaagaatgctggtgttccaactgta
ccaggaagtgacggactattgcagagtactgaagaaggtgtaaagcttgccgaggagatt
ggttacccagtgatgattaaggcaacagctggtggtggtggacgtggaatgcgtcttgct
aaagaacctaacgagttcgtaaaattattgcagcaagctaagagtgaagcagcagctgca
tttggaaatgatggcgtttatctggagaagtacatcgtaaatcctaggcacattgaattt
caggttttggcggacaagtatggtaatgttgtacactttggagagcgtgattgcagtatt
cagagaagaaaccaaaagttgctggaggaagcaccatcccctgcattgacagcagagctg
aggaaagccatgggtgatgctgctgtggcagcagcagcatctataggttacattggtgtt
ggaaccatagagttcctattggatgagagaggctccttttacttcatggaaatgaacact
cgtattcaggtagagcatccggtgacagaaatgatatcctctgttgatctgatagaggaa
cagatccgtgtcgctatgggagaaaagctccgatacaaacaggaggatattgtgcttaga
ggacattcaattgaatgccgtataaacgcagaagatgctttcaaaaacttcagacccggc
ccagggagaatcacttcatatttaccagctggaggtccatttacgcgtatggatagccat
gtttatcctgactatgtggttccacctagctacgattccctgctgggaaagctcatcgta
tgggctccaacacgcgagagggctattgagcgcatgaaaagagcacttgatgacaccgtt
atcactggagttcctaccacaatagaatatcataaactcatccttgatatcgaggacttt
aagaacgggaaagttgatactgctttcattccaaagcatgaggaagaattagctccgcct
cagcaaattgttccagcagcaagcaaggagctgatcaatgccaatgcttaa
DBGET
integrated database retrieval system
