Solanum lycopersicum (tomato): 101268039
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Entry
101268039 CDS
T02665
Symbol
RPT4a
Name
(RefSeq) 26S proteasomal subunit RPT4a
KO
K03064
26S proteasome regulatory subunit T4
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101268039 (RPT4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sly03051
]
101268039 (RPT4a)
Proteasome [BR:
sly03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
101268039 (RPT4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
Prot_ATP_ID_OB_N
AAA_14
AAA_7
TIP49
Parvo_NS1
RNA_helicase
AAA_33
Mg_chelatase
IstB_IS21
AAA_28
AAA_3
AAA_18
NPHP3_N
TsaE
NACHT
Sigma54_activat
AAA_24
ABC_tran
bpMoxR
AAA_25
ATPase_2
AAA_11
ATPase
AAA_lid_PRS2_C
ResIII
PhoH
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
101268039
NCBI-ProteinID:
NP_001315347
LinkDB
All DBs
Position
1:complement(92854728..92860033)
Genome browser
AA seq
398 aa
AA seq
DB search
MATEEDAVRRRTALADYRKKLLQHKELDARVRTVRENLRATKKEYAKTEDDLKSLQSVGQ
IIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREV
DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGP
PGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYARDHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL
DRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAAVKLAEGFNGADMRNVCTEAGMFAI
RAERDYVIHEDFMKAVRKLNEAKKLESSAHYSADFGKE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaagaagacgccgtccgacgccgtactgcactcgccgattatcggaaaaag
ctccttcagcacaaggagcttgatgctcgggttcggacagtgagagagaacttgcgggct
accaaaaaggaatatgctaaaacagaagatgatttgaagtcacttcaaagtgttggacag
atcataggagaagtgctccgacctctagataatgagcgtttgatagtaaaagctagcagt
ggtccgaggtatgtagttggctgtcgcagtaaagtggacaaggaaaaactgacttcaggc
acaagagtggttctcgatatgacaacacttacaatcatgcgggcactcccccgtgaagtt
gatcctgttgtatacaacatgcttcatgaagatcctggcaacatcagttactctgccgtg
ggtggactgtcagatcagatcagggagctgagagaatccattgagttacctctaatgaac
cctgagcttttcctccgggttgggattaagcctccaaagggtgttcttctctacgggcct
cctggaacaggcaagacattgttagccagggcaatcgctagcaacatagatgccaatttc
ttaaaggttgtatcaagtgccattattgataagtacattggtgagagtgcaagattaatt
cgggaaatgtttaactatgcgcgtgatcaccaaccttgcatcatattcatggatgagata
gatgcaattggtggacgtcgttttagtgagggaaccagtgcagaccgtgaaatccaaaga
acgctcatggagttgctcaatcagttggatggatttgaccagcttggaaaggtaaaaatg
attatggcaacaaatagacctgatgttttggacccagctcttcttcgtcctggtcgatta
gatagaaagatagaaatccccttgcctaatgaacaatcaagaatggaaatcctcaagatc
catgctgctgggattgccaaacatggtgaaattgattatgaggctgctgttaagctcgct
gagggatttaatggggctgatatgcggaatgtttgcactgaagctggtatgtttgcaatt
cgtgcagagcgtgattatgtcatccatgaggatttcatgaaggctgtaaggaaactgaat
gaagcaaagaaacttgaatcaagtgctcactacagtgctgattttggcaaggaataa
DBGET
integrated database retrieval system
