KEGG   Solanum lycopersicum (tomato): 101268040
Entry
101268040         CDS       T02665                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03083  Polycomb repressive complex
sly04120  Ubiquitin mediated proteolysis
sly04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101268040
   04120 Ubiquitin mediated proteolysis
    101268040
  09126 Chromosome
   03083 Polycomb repressive complex
    101268040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101268040
   04121 Ubiquitin system [BR:sly04121]
    101268040
   03036 Chromosome and associated proteins [BR:sly03036]
    101268040
Membrane trafficking [BR:sly04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    101268040
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     101268040
   Cul7 complex
     101268040
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101268040
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     101268040
SSDB
Motif
Pfam: Skp1 Skp1_POZ VipE HopW1-1
Other DBs
NCBI-GeneID: 101268040
NCBI-ProteinID: XP_004231048
LinkDB
Position
1:93955563..93957318
AA seq 158 aa
MSSPKKILLKSNDGEVFEVEEAVALESQTIKFLIEDDCAGSHIPISNVSGNILAKVLEYL
KRHVEEESTSKTEGADADAALKVFDAEFVKVDQKTLFDLILAANYLNIKSLLDLTCQTVA
DMIKGKTPEAIRNTFNIKNDFTPEEEEEVRRENAWAFE
NT seq 477 nt   +upstreamnt  +downstreamnt
atgtcttctccaaagaagatcttgttgaagagcaacgatggcgaggttttcgaggtggag
gaagcggttgctttggaatctcagaccatcaagtttttgatcgaggacgattgcgccggt
tcgcacatccctatttccaatgtttctggcaacattttggcaaaggttctcgagtacctt
aagcgccatgtggaagaggaatccacatctaagacagagggcgccgacgctgatgctgct
ttgaaggtctttgatgctgaatttgtcaaagttgatcagaaaactctctttgacctgatt
ctggctgcaaactatctgaacatcaaaagtctgcttgatctgacctgccagactgtggct
gacatgatcaaaggtaagaccccagaggccattcgcaataccttcaacataaagaacgac
ttcactccagaggaagaggaggaggttaggagggagaatgcgtgggcatttgaatga

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