Solanum lycopersicum (tomato): 101268076
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Entry
101268076 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K17925
sorting nexin-13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sly04990
]
101268076
Domain-containing proteins not elsewhere classified [BR:
sly04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101268076
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
AAA_lid_13
Motif
Other DBs
NCBI-GeneID:
101268076
NCBI-ProteinID:
XP_004252340
UniProt:
A0A3Q7J950
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Position
12:complement(61070469..61080409)
Genome browser
AA seq
1123 aa
AA seq
DB search
MSTERQSVTVRDLVEEAKKRVVFLVICAIGLSYLMSLTSSSVFVNLPVAALFIVSLRYLS
LDFDARMKAVTYKSKSSISNSTFQRKHIDIPRTVNEKPTWRKKVNSPAVEEAIDHFTRHI
VSEWVTDLWYSRITSDTQGPEELVQIMNGVLGEISRRMRTINLIDLITRDIINLIRTHLE
LFRASKIKIQKKRPISLTIEELDVELKLVLAADNKLHPALFSPEAEHKVLQHLMDGLISY
TFQSEDAQCSLFHNIVRELLACVVMRPVLNIANPRFINERIESLVVSVKKGDKGNTAAET
EPQSRPVGSGKISADHFSRVLDPSAKGVELVQLKNDQPNNTEEHAMNTMNGTDLLLDPLL
SLDARSTRSWSSLPSQADADDGRGIHRHHSGGEWGERLDLLSRRKTEALAPENLDNIWAK
GRNYKRKEEANLASDKLKKSSLISAPKSPGHSKEAKQKESERANKVGAKHYVKDNATSQG
DLKRPIYPPDYSYQEENEHSSDEDESESTSSYTTEDEEPSSVTGFDSPGTQVWDGKNIRN
VNHIHHPLENNEGHKRRNGKASKTHIRSKHLNRVLSGRKRSRLSNQTEHLWQETQRTSFL
QGDGQDILKSKENVKLDGPSDDSETEIFSRISSDTNASSYVSSRSFSEIHSMGPYSTTGS
IIADSFLKLRSEVLSANIVRSGSKTFAVYSISVTDMNNNSWSIKRRFQHFEELHWRLKEF
PEYNLHLPPKHFLSSSLDGPVIRERCKSLDIYLKKLLLLPTVSNSIEVWDFLSVDSQTYS
FSNSLSIIETLQADLDRTVRQKSKEPPHGISPRTDLLSSKGKHSNTESKNLTSRIEHDHA
GHESRFRKDYVALSPPKRPLTETFEDSNSDNKVHANRKSTPNMQTTSKSVETNSLASPES
LVAATVDPTFPSEWVPPNLTVPILDLVDVIFQLQDGGWIRRNAFWVAKQVLQLGMGDAFD
DWLIEKIQRLRRGSVVAAGIQRVEQILWPDGIFITKHPARQHPAPTSSPNCPPGQPSTPL
SSPRLENSQKLDEMQKLEAEQRAKFVYELMIDKAPAAIVGLVGHKEYEQCAKDLYYFIQS
SVCMKQLVLDLLELLLVSAFPELTSVFNTLHEEKERFGELKID
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaaggcaatcggtgactgttcgagaccttgttgaagaagctaagaagaga
gttgttttcttagtcatatgtgctattgggctctcctatttaatgtctctgacgagctcc
tcagtttttgtcaacttgcctgtagctgcactctttattgtttcccttcgttatctgtct
cttgattttgacgcgcggatgaaagctgtaacatataaaagtaagtcatccatatcaaac
agcacttttcagaggaaacatattgatattccaagaacagttaatgagaagcccacctgg
aggaagaaagtaaattcacctgctgtcgaagaagcaatagatcacttcaccaggcatata
gtttctgagtgggtcacagatctctggtactcccgcataacctctgatacacagggtcct
gaggaactagtgcagatcatgaatggtgtactaggggaaatttcacgtcgcatgagaact
attaatcttatagatctcatcacaagagatattatcaatctaatacgcactcacttggag
ctgtttcgtgcaagcaaaataaagattcagaagaaacgcccaatttctttgacaattgaa
gagctagatgtggagcttaaactggtgttggctgcagacaacaaattacatcctgctttg
ttttctccggaggctgagcacaaagtactccagcatcttatggatggtctcatttcatac
acttttcagtcagaggatgcacagtgctctttattccacaacattgtcagggagcttctt
gcttgtgttgtaatgcgaccagtattaaatatagctaatccaaggttcatcaacgagagg
attgagtctctagttgtttctgtaaagaagggtgataaagggaacacagcagcagaaact
gaaccacagtccaggccggttggatctggtaaaatatcagcagatcatttttctcgggtt
ttagatccttctgccaagggcgtagagcttgtacaactaaaaaatgaccaacctaataac
actgaggagcatgccatgaacactatgaatggaacagatttgttgttggaccctttgctt
tcacttgatgctcggtctactcgttcttggagttctttgccatcacaagccgatgcagat
gacggaagaggtattcatagacaccattctggaggagagtggggtgaaaggctagatttg
ctttctcgtagaaagactgaagccctggcccctgaaaatttagacaatatatgggcaaaa
ggcagaaactataaacggaaagaagaggccaatctagcatctgataaactcaagaagagt
tcgttgataagtgcaccaaaatcgccaggacactcaaaggaagctaaacagaaagagagt
gagagagcaaacaaggttggagctaagcattatgtgaaggacaatgctacctcgcaaggt
gatttgaaaagaccaatttatcctccagattactcgtatcaagaggaaaatgaacatagc
tcagatgaggatgaatcagagagcactagttcttacactactgaagatgaagaacccagc
agtgtgactggttttgactctccaggaactcaagtgtgggatgggaaaaatataaggaat
gtcaatcacattcatcatccacttgaaaataatgaaggccataagagaagaaatggaaaa
gctagtaaaacacatattcgctctaaacacttaaatagagtactgtctggacggaaaagg
tctagattaagcaaccaaacggaacacttgtggcaagagacacaaagaaccagcttctta
cagggggatggacaagatatattaaaatccaaagaaaatgtgaaactggatggtccaagt
gatgactctgagacagaaatattcagtagaatttctagtgacactaacgcatcatcatat
gtatcgtcaagaagcttttcggaaattcatagtatgggtccttattctacaacaggttct
ataattgctgattcttttttgaaattaagaagtgaggtcctgagtgctaatatcgtaaga
agtggctccaaaacttttgctgtttattccatatctgttacagacatgaacaataatagt
tggtctatcaaaagaaggtttcaacattttgaggagctacactggcgtcttaaggagttt
ccggagtacaatcttcatttacctcccaagcatttcctctcttcaagtctggatggtcct
gtcattcgagaacggtgcaaatcacttgacatatatttgaagaaacttttgctgctccca
actgtttccaactccatcgaagtatgggacttcctcagtgtggattcacagacatatagc
ttctcaaactccttgtccataattgaaacattacaggctgacctggacaggactgtacgc
caaaagagtaaagaacctccgcatggtataagccctcgaactgatctgttatcctccaag
gggaagcattctaatactgaaagcaagaatctgacttcaaggatagaacacgatcatgca
ggacatgaatcaaggttcaggaaagattatgttgcactctctcctccaaaaagacctctc
acagaaacttttgaggattcaaatagtgacaacaaggtgcatgcaaatagaaaatcaacc
ccaaacatgcagacgacatcaaaatcagttgaaactaactcacttgcatcacctgaatct
cttgttgctgctaccgtggatcctacctttcccagtgagtgggtgccaccaaatttaact
gtgcctatattagatcttgtcgacgtcatttttcagctccaagatggtggatggatcagg
aggaatgcattctgggtggctaaacaggttttacaactaggaatgggtgatgcatttgat
gattggctgattgagaaaatccagcgtctgcgcaggggttcagtagttgcagcaggtatc
caacgtgttgagcagattctctggccggatggtatattcatcacaaagcacccagcacgt
caacatcctgctcccacctcatcccctaattgtcctccaggccaaccttcaactccatta
tcttcgcccaggctggagaattcacagaaactggatgagatgcagaaactagaagcagag
caacgtgcaaaatttgtttatgagctaatgattgataaggcaccagctgctattgtagga
cttgttggtcacaaagaatacgaacagtgtgcaaaggatctttattacttcatccagtca
tctgtgtgtatgaagcagttagtccttgatcttctcgagctattactggtgtccgcattc
ccagagctgacttctgtatttaacacattgcatgaggagaaggagagatttggagaactc
aaaatagattaa
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