Solanum lycopersicum (tomato): 101268093
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Entry
101268093 CDS
T02665
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
sly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101268093
09124 Replication and repair
03420 Nucleotide excision repair
101268093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101268093
03400 DNA repair and recombination proteins [BR:
sly03400
]
101268093
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101268093
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101268093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Zn_ribbon_GTF2H2
IBR
Motif
Other DBs
NCBI-GeneID:
101268093
NCBI-ProteinID:
XP_004237420
UniProt:
A0A3Q7G5L2
LinkDB
All DBs
Position
4:complement(54333300..54345486)
Genome browser
AA seq
414 aa
AA seq
DB search
MNTEEKRFNQEEEDEEENGRGREAWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYR
RRLRTATAARIQKGLIRYLYIIIDFSRAAAEMDYKPSRMVVVARQVEAYIREFFDQNPLS
QIGLVILKDGVAHCLTDLGGSPEAHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGH
REALILYSALSTCDPGDILETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALD
EPHLKELVLEHAPPPPAIAEFAVANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRC
KARICELPTECCICGLTLVSSPHLARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQL
SLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMEE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggaagaaaaaagatttaatcaagaagaggaggatgaggaagaaaatgggaga
ggtcgagaagcatgggaaagaacttatgcagatgaaagatcatgggagtctttacaagag
gatgaatcaggactccttcgtccaattgacaacaaaactctatcccatgctcagtatcga
cgacgtctccgcactgcaactgctgcacgaattcagaagggtttgattcggtacctctac
attatcattgatttctccagggcagctgcagaaatggattataaaccaagccgaatggtt
gtagttgctagacaagtggaggcttatataagagaattttttgaccagaatcccctgagt
caaattggcttggtgatcttgaaagatggagtagctcattgcttaacagatcttggtggc
agtcccgaggctcatatcaaggcattgatgggtaaattggggacctctggtgatgcatcc
cttcagaatggcctagatcttgtgtgtgatctcctaaatcaaatcccatcgtatggtcat
cgtgaagcccttatcttgtattcagctcttagcacatgtgatccgggggatatactggaa
accatccaaaaatgcaaagcgtccaagataaggtgctcagtaattggtctctctgcagaa
ctctacatatgcaagcatctctgccaagagactggtggaatgtattttgttgcattggat
gagcctcatttaaaagagttggtattggagcatgccccacctcctccagctattgcagag
ttcgctgttgcaaatttgattaagatggggttcccccaaagaacagcagagggtgtcatt
tcaatttgttcatgtcataaagaggctaaagttggtggtggatacacttgtccgagatgc
aaagcgcgcatatgtgagctgcctactgagtgttgcatttgcggactgacccttgtatct
tctccacatttggcaaggtcatatcaccatctcttcccaataaggccatttgatgacgtt
tcaccctcagctctgaaagattttcacaagttaccaaagaattgctttggttgccaactg
agtcttctaaatcctggaaatttgccaggtccgcaggttgcttgtccaaactgcaaacaa
cacttctgccttgattgtgatatttatatacatgagagcttgcacaattgtccaggttgt
gagagcttaaggaattccaagaccattagtgatatggaagaatga
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integrated database retrieval system
