Solanum lycopersicum (tomato): 101268100
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Entry
101268100 CDS
T02665
Symbol
SWI3B
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101268100 (SWI3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101268100 (SWI3B)
03036 Chromosome and associated proteins [BR:
sly03036
]
101268100 (SWI3B)
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101268100 (SWI3B)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101268100 (SWI3B)
PBAF complex
101268100 (SWI3B)
GBAF(ncBAF) complex
101268100 (SWI3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Myb_DNA-binding_2
SWIRM-assoc_1
Motif
Other DBs
NCBI-GeneID:
101268100
NCBI-ProteinID:
NP_001362572
UniProt:
A0A3Q7G8R8
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Position
4:complement(68201429..68205346)
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AA seq
489 aa
AA seq
DB search
MPESGEIKSQAAKSDPQTTSPPPSQQPQTAALPLKRPQQLESSPNPTTPSVTDPKDVTPT
TISSRITEPDFIYIPSYSRWFSWNSIHECEVRFLPEFFDGRSPSKNPKTYKYYRNTIIRR
FRDNPTKKITFTEARKTIVGDVGSIRRVFDFSETWGLINYTANSSKSLIKWEEKESKSTS
ASAPQNADANGTSTDFTLPKKRICNLCKTVCRIACFASDKYDLTLCARCYVSNDNRVGVN
NSELRRVEISEEVKTDWTDKETLHLLEALMHYGDDWKKVAEHVGGRSTKECVARFVKLPF
GEQFMGPPESAEMDSESRSETMYLQSKRRRLTPFADTSNPIIAQAAFLSALAGKEVAELA
AHAAVTALSEIGEGITTGSLESVLCGAERQELDGKDKLERPLVEAMAQFEKEALDLERAV
SDVAIETKEIEVRIAHFEERDLQMEKEWQQLMQLKNLIFIDQLTFLVNKSGAPRAGETIR
EEVIDVKAE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaatcaggcgaaatcaagtcacaggcagctaaatctgaccctcaaactacctct
ccgccaccgtcgcagcaacctcaaacggctgctttgccactaaagcgtccccaacaactg
gaatcgtccccaaacccaacaactccttcagtcaccgatcccaaagacgtcactcccacc
actatctcctcccgtattactgaacctgatttcatctatattcccagttattcccgttgg
ttttcatggaatagcattcatgaatgtgaggttcgctttcttcctgaattctttgatgga
aggtcgccttccaagaaccctaagacatacaaatactataggaatactattattcgtaga
ttcagagataaccccactaaaaagataacctttactgaggctcgcaagaccattgttgga
gacgtcggctcaattcgtagggttttcgatttctcagagacatggggtttgatcaattac
actgctaactcttccaagtctctgatcaagtgggaagaaaaagagtcaaagtcaacatct
gcctcagctccgcaaaatgctgacgccaatggaacgtccactgattttactctccccaag
aaaagaatctgcaatctctgcaaaacagtttgcaggattgcttgtttcgcttctgataag
tatgatttgactctttgtgcaagatgctatgttagtaatgataatagagttggcgtgaat
aattcagagcttcgacgggttgagattagtgaggaagttaagacagattggactgacaaa
gagactttgcaccttttagaagctcttatgcattatggcgatgattggaagaaggttgct
gagcatgttggtggcagaagcactaaggaatgtgtggctagatttgtcaagcttcctttc
ggtgagcagtttatgggccctcctgaatctgcagaaatggatagtgaatccaggtctgaa
actatgtatcttcagtctaagagaaggcgcctcacaccctttgctgatacaagcaaccca
attatagcacaggctgctttcctctctgctcttgctggaaaagaagttgcagaattagca
gcacatgccgctgttactgctttgtctgagattggtgaaggaataacaacagggagtcta
gaatctgtactctgtggtgcagagcggcaagaattggatggcaaggataaactcgaaaga
cctcttgttgaagcaatggctcagtttgagaaggaggcattggacctggagagagccgtc
tctgatgtggcaattgagacaaaggaaattgaggtcagaattgctcattttgaggaacgt
gatttacagatggagaaggagtggcaacagctgatgcaacttaagaacctgatcttcatt
gatcaacttacttttctagtaaataaatctggtgctccaagagctggggaaaccattagg
gaggaggtgatagatgttaaggcagaatga
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