Solanum lycopersicum (tomato): 101268498
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Entry
101268498 CDS
T02665
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101268498
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
101268498
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101268498
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101268498
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101268498
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101268498
Prokaryotic type
101268498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Cation_ATPase_N
Motif
Other DBs
NCBI-GeneID:
101268498
NCBI-ProteinID:
XP_004228527
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All DBs
Position
1:complement(2721616..2735140)
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AA seq
592 aa
AA seq
DB search
MPTVSVGRDRLFEALGRTYTDEEFDELCFQFGIELDDITTEKAIQRKEKHLEEEGVEDDG
ETIYKIEVPANRYDLLCLEGLAQALRIFNGLDPIPTYKVANIGKESMLEMHVKTETSKIR
PYVVCAVLRGVTFDEAKYNSFIELQDRLHQNICRRRTLVAIGTHDLDTIEGPFTYEALPP
AEINFVPLKQTRNFRADELMEFYKSDLKLKKFLHIIENSPVYPVIYDSKRTVLSLPPIIN
GAHSAISLKTKNVFIECTATDLTKANIVLNTMVTMFSVYCERKFEVEPVKVTYPDGKSYV
CPDLSIYNMNVPLSYITGIIGVQLPEDKVASLLHKMQLRAEKSVSEDKEVKFVVSVPPTR
SDVLHPCDVAEDVAIAYGYNEIPKRKPASLNPLPLSQFSDLIRTEIAMTGYTEVLTWILC
SKKEIFSMLNREEDNSAVTIADSRTSEFEVVRPSLMPGLLRTVGHNKDHPKPIKIFEVGD
IVLLDDTKDVGAVNRRHLAALYCGANSGFELIHGLVDKIMEATGTNFVSPGNSTGYYIEK
SEEPAFLQGRQANVIYGGKQIGTFGIVHPKVLKEYDIPDVCSFLELDMQSFL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgttagcgttggaagagaccgtctgttcgaagcccttggccgtacttacact
gatgaagaattcgatgaattgtgctttcagtttggtattgagctcgacgatataacaaca
gaaaaagcaatacagagaaaagagaagcatttggaggaagagggagtggaagatgatgga
gagactatatacaaaattgaagttccagcaaacagatatgatttgctttgtcttgaagga
ctagcgcaagctcttcgaatatttaatggacttgacccgatcccaacatataaggtggca
aatattggtaaagaatctatgcttgaaatgcatgtgaaaacagagacatccaagattcgt
ccatatgttgtatgtgctgttttaagaggtgtaacatttgatgaggctaagtacaatagc
ttcattgaactacaagataggctgcatcaaaacatttgcaggcgaagaaccttggtggca
attggtacccatgacctagatacaattgaaggacctttcacgtatgaggctttgcctcct
gctgaaataaattttgtgccattgaagcagaccagaaacttcagagctgatgagctgatg
gaattttacaaatcggatttgaagctgaagaagtttctacacataatcgagaattcaccc
gtgtaccctgttatatatgatagtaaaaggactgttttgtctttaccccccatcattaat
ggtgcacattcagccatttcgctgaaaacaaagaacgtgtttatagaatgtacagccaca
gatttgacgaaggccaacattgttctgaacacgatggtaactatgttttcagtgtactgt
gagcggaagtttgaagttgaaccagttaaagttacatatcctgatggaaaatcgtatgtt
tgtcccgatctttcaatctacaacatgaatgtgcctttgtcctacattactggcatcatt
ggagttcaattgccagaggataaggtggctagtttgttgcataaaatgcaattgcgtgca
gagaaatctgtatcagaagataaagaagtcaagtttgttgtatctgttcctcccacaaga
agtgacgtacttcatccatgtgatgtagcggaggatgttgcaattgcttatggctacaat
gagatcccaaagagaaaacctgcatctttgaatcctttacctctcagtcaattcagtgat
cttattcgtacagagattgcaatgactggttatactgaggtgttaacatggatcttgtgt
tccaagaaagaaattttctccatgttgaaccgtgaagaggataattctgctgtgaccatt
gctgattctcgtacgtctgaatttgaggttgttcggccttctctcatgcctggactattg
agaactgtgggccataataaggaccatccaaagcctataaagatttttgaagttggtgat
atagtcctcttagatgatacaaaagatgttggcgcagtaaaccgtcgccaccttgctgct
ctgtattgtggagcaaactcaggatttgagctaatacatggtctagttgacaaaatcatg
gaagcaactggcactaattttgtatcacctggaaacagtacaggctactacatagaaaaa
tcagaggagcctgcatttcttcagggaagacaggctaacgttatttatggaggaaagcaa
attggaacattcggcattgtgcaccctaaggtcctcaaggagtatgacattccagatgtc
tgctccttcctggagcttgacatgcagagtttcctatag
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