Solanum lycopersicum (tomato): 101268503
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Entry
101268503 CDS
T02665
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101268503
04121 Ubiquitin system [BR:
sly04121
]
101268503
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101268503
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101268503
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101268503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101268503
NCBI-ProteinID:
XP_025885981
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All DBs
Position
1:complement(46815490..46817127)
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AA seq
360 aa
AA seq
DB search
MVLTDSMDGRGLSRYWCHHCSRRVNPMMEVELKCPICQLGFIEEMGSDDNQTLLDSDSDP
DHALSLWAPILLGMMSNSRRRSRLGHLEFEEDEDDHTREADTQLDPDLASIMNRRRRNSA
TILQLLQGIRAGMLAESENPNPENENRDTGRSRDRERVILINPFNQTIIVQGSDNNSRNQ
PIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETLQCSVCLEDF
EIGTEAKEMPCRHKFHGGCILPWLELHSTCPVCRHQLLSDESKVESDDGSANTNAQSSNG
NGTRYEDEDTRNENGRRFPVSLPWPLSGLFSTPNSGSNGNSSSMTSSASNANSNAHMHED
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgacagattcaatggacggaagaggattgtcaagatattggtgtcatcattgt
tcaaggagggtgaaccccatgatggaggttgagttaaaatgtcccatttgtcaactagga
tttattgaagaaatgggttcagacgataatcagacccttttagattctgattctgatcct
gatcatgctctctcactttgggcacctatcttgttaggcatgatgagcaactctcgtcgt
cgttctagacttgggcatctcgaatttgaagaagatgaggatgatcatacacgtgaagcc
gatacacaacttgatccagacttggcatctataatgaataggcgtaggaggaactctgcc
acaattctccagctcttacaaggtattcgtgctggaatgttggctgagtcggagaaccct
aatcctgagaatgaaaacagggacacaggtagaagtagggatcgtgagcgtgttatactt
ataaatccgttcaatcaaaccatcattgtgcagggttcggataataattccaggaaccaa
cctattggctcattgggtgattatttcattggtcctggtttagacgtgttgctgcaacat
ttggcagagaatgatccaaataggtatggtactccaccagctcaaaaagaagttgtagag
gcattgcctgtggtgacaattgatgagactttgcagtgttctgtctgtttggaagacttt
gagattgggactgaagccaaagagatgccttgtaggcacaagtttcatggtggctgcatc
ttaccatggctggagcttcatagcacatgtccagtctgtaggcaccagttgctctctgat
gaatcgaaagttgagtctgatgatggaagtgctaacacaaatgctcagagtagtaatggt
aatggtacaaggtatgaagatgaggatactaggaatgaaaacggtcgccggtttccagtg
tcacttccgtggcctttgagtggcttgttttcaacaccaaactcaggtagtaatggaaat
tcatcatcaatgacgtcttctgcatcaaatgcaaactccaatgctcatatgcatgaggat
taa
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