Solanum lycopersicum (tomato): 101268612
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Entry
101268612 CDS
T02665
Name
(RefSeq) CCCH zinc finger familyprotein
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101268612
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101268612
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101268612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
Torus
zf-CCCH_2
zf-C3HC4
zf-CCCH_3
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
FANCL_C
zf-RING_UBOX
IBR_1
zf-rbx1
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
101268612
NCBI-ProteinID:
NP_001334310
UniProt:
A0A3Q7EIT0
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Position
1:complement(77727288..77735173)
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AA seq
360 aa
AA seq
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MSRRVLCKFFVNGACLKGEYCEFSHHWKDPPNNVCTYYQKGLCAYGNRCRYRHVKVSEQH
SLPSSSAPAQHLFSASPPTTLSPGMLADGTGILSGISSEYLASGRPFYPPNQPVWSENSE
HHDAAVIDNIVELKRMNPADRSICSLAAAGKCPREEQCPYIHGDLCPICAKNCLHPFRPQ
EREEHIRICEKRQKRLELLKHSQEIECSVCLERVLSKTTAAERKFGILFECDHPFCISCI
RNWRSGTPSSGVDINSTFRTCPICRKLSYFVIPSVTWFSTKEEKQIILDSYKAKLRSIDC
KHYDFGNGTCPFGNSCFYKHQYRDGHLEEVVPRHLGHENGRTLIAKNIRLSDLLGNLRRR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaagggttctttgtaagttctttgtaaatggtgcatgtctgaaaggagagtac
tgtgagttctcacatcattggaaagatcctccaaacaatgtatgcacatactaccagaaa
ggattatgtgcctatggcaacaggtgtagatacagacatgttaaagtttctgaacaacat
tcacttccatcttcgtcagctccagctcaacatcttttttcagcttctcctcccactacc
ctctcgcctggaatgctagcagatggtacaggaatcttgtcaggcatttcttccgagtat
ttggcttcaggccgacctttttaccctccgaaccagcctgtatggagtgaaaattcagag
catcatgatgcggcagttattgataatattgtcgagttaaagaggatgaatccagctgat
cgatcaatttgctctcttgctgctgctggtaaatgtccacgggaagagcaatgtccttat
attcatggagatttatgtccaatctgtgcaaagaattgcttgcatccctttcggcctcag
gaaagagaggagcatataagaatatgtgagaagaggcaaaagcgccttgagttactgaag
catagtcaagaaatagagtgcagtgtgtgtcttgaacgggtactctctaagacaactgca
gcagagcggaagtttgggatcctttttgagtgtgatcatccattttgtatatcatgtatc
aggaattggcgcagtggtaccccttcctctggggttgatatcaactcgacatttaggacc
tgccccatttgccggaagctttcatattttgtcattccaagtgtcacttggttctccaca
aaagaagaaaaacaaattatccttgacagctataaagccaaactcaggtctattgattgc
aagcactatgactttggcaatgggacttgcccatttggaaatagttgtttctacaagcat
caataccgtgatggccatctggaggaagtggtaccgcgtcatcttggtcatgaaaatgga
agaacattgattgctaaaaatattaggctctcagacctccttggcaatttgagaagaagg
tga
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integrated database retrieval system