Solanum lycopersicum (tomato): 101268876
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Entry
101268876 CDS
T02665
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101268876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101268876
03036 Chromosome and associated proteins [BR:
sly03036
]
101268876
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101268876
Coactivators
SAGA/TFTC/STAGA complex
101268876
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101268876
STAGA complex
101268876
TFTC complex
101268876
SAGA complex
101268876
SLIK complex
101268876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_like
LisH_PAC1
PALB2_WD40
LisH
RAB3GAP2_N
Beta-prop_VPS8
Cytochrom_D1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101268876
NCBI-ProteinID:
XP_004241800
UniProt:
A0A3Q7GZ21
LinkDB
All DBs
Position
6:43578075..43594096
Genome browser
AA seq
685 aa
AA seq
DB search
MDEEEIEKAVVAYLKKKGFKQTEIAFQEEQQVNKNSSSSIHNNNNSANSQIDPDLTKKIL
SFSEFETSPQRYQEEYSKLRSWAYSSLDLYKHELLRVLYPVFIHCFMELVARGYIQEARA
FFNSYREDHEMTHLRDLQKLEGVLSPSHLEEMEFAHSIRVSKVNIKMCQYSYDLLLQYLH
KTESITMLGIINERINFQVSPGQPGSISGDTEVVTLVASGHDASLINQKEVLWGMLEDSL
EERLEKTGGSVPDSEKFDGDPKEGEVEENKKKSIEGGKHGAPLKKLKKDKVGIATGKSSR
TESSTVTTAPRVKPELALPAIPVEVELSILEDLRNRVQLSNASLPSVSFYTFVNTHNGLN
CASISHDGSLVAGGFSDSSVKVWDMAKLGEQTGPSFLQGETDSPSSEHVLGANGGRRCYT
LLQGHSGPVYSASFSPHGDFLLSSSSDSTVRLWSTKLNANVVCYKGHNYPVWDVQFSPAG
HYFASSSHDRTARIWSVDRIQPLRIMAGHLSDVDCVRWHANCNYIATGSSDKTVRLWDVQ
SGDCVRIFIGHRSMILSLAMSPDGRYMASGDEDGTVMMWDLSSGRCITPLTGHSSCVWSL
AFSGEGSLLASGSADCTVKLWDVTTSTRAPLKEENKSGGNNRLRLLKTLPTKATPIYALH
FSRRNLLFAAGAFSKSARVPCFKVS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagagattgagaaagcagtcgtagcgtatttgaagaagaagggtttcaag
caaacggagattgcttttcaagaagaacagcaagtgaataaaaacagttcttcttcaatc
cataataacaacaactcagcaaattctcagattgaccccgacttaaccaaaaaaatcctt
tctttctctgaatttgaaaccagtccccaacgataccaagaagaatatagcaaacttcgg
tcatgggcctatagttcactggatctgtataagcatgagttgcttcgtgttttatatcct
gtatttattcattgtttcatggaacttgtcgctagaggttatattcaagaagcacgagcc
tttttcaatagttaccgtgaagaccatgagatgacgcatctgcgtgatcttcagaagtta
gaaggcgtcctctcaccttcccatctagaggaaatggaatttgctcattctatacgggtg
agcaaagtgaacattaagatgtgtcagtactcctatgaccttctgttgcaatacttgcac
aagacagaatctattacaatgcttgggatcatcaatgagcgcattaattttcaagtttct
cctggacagcctggctctatatctggtgatacggaagttgtaactcttgttgcaagtggc
catgatgctagtctcataaatcagaaagaagttctttgggggatgcttgaagattcttta
gaagaacggttagaaaagactggaggttctgttccagattcggaaaagtttgatggagat
ccgaaggaaggagaagtggaagaaaacaagaagaagtcaattgaaggtggtaaacatggt
gcacctcttaaaaaactaaagaaggacaaagttgggattgcaacagggaaatcttctcgt
acagagagcagcacagtgacaactgcaccacgtgtcaaaccggaacttgctttacctgct
atacctgtagaggtagaactttctattctggaagacttgaggaaccgcgtacagttgagt
aatgcatcattgccctctgttagcttctatacatttgttaatacacacaatggactaaac
tgtgcatcaatatcacatgatggatcactagtggctggtggattctcagattcatctgtg
aaggtctgggacatggcaaagcttggggaacaaactggtccatcttttttgcagggggag
actgattcaccttcaagtgagcatgtgcttggcgcaaatggtggaagaagatgttataca
ttacttcagggccattcagggcctgtttattctgcatcattcagtccgcacggggatttt
cttctttcttcatcatcagattcaactgttcgcttatggagcacaaagttaaatgctaat
gttgtttgctacaaaggccacaattacccagtatgggatgttcagtttagcccagctgga
cattattttgccagttcttcacatgaccgcactgcaaggatctggtctgtggacaggata
cagcctctaagaataatggccggacacttgtcagatgtagattgtgtgcgatggcacgca
aattgcaattacattgcaaccggatcaagcgacaaaactgtacgcttgtgggacgtccag
agtggtgactgtgtcagaattttcattggtcataggagtatgatcctatcattggcaatg
tctcctgatggtcgatatatggcatccggtgatgaagatggaacagtcatgatgtgggat
ctctcaagtggacgttgtattactcctttgaccggtcattcctcttgtgtgtggtcactt
gcttttagtggtgaaggttcacttcttgcatcgggctctgcggattgcactgtaaaatta
tgggatgtaaccacaagcaccagagcgccactaaaagaagagaacaaatctggaggtaac
aataggcttcggttattgaagaccctacctaccaaagctacaccaatctatgctttgcac
ttttcacgaagaaatcttttatttgctgctggagctttctcgaaaagtgcacgagtccct
tgctttaaagtctcttga
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