Solanum lycopersicum (tomato): 104647326
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Entry
104647326 CDS
T02665
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104647326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
104647326
Membrane trafficking [BR:
sly04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
104647326
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
XhlA
YqjK
ETRAMP
Motif
Other DBs
NCBI-GeneID:
104647326
NCBI-ProteinID:
XP_010320915
UniProt:
A0A3Q7H8M9
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All DBs
Position
5:6484943..6488583
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSVNLSRKCNSAALLADGEPKKQQISELKVGLDDADVLIRKMDLEA
RSLQPSLKATLLAKLREYKSDLNKLKKEVNKLTLTSANQAAHDLESGMMDPHAASASQRE
RLAMSTERLDQSSDRIRESRRIALETEDLGVSILGDLHQQRETLLHSHNKLHGVDDAIDK
SKKILTSMSRRISRNKWIMGSVIGALILAIIIILYFKLFHH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagtatttgagggatatgagaggcagtactgtgaactttctgtcaatttgtct
cggaaatgcaattctgctgctcttttggctgacggagagccgaaaaagcaacagatttcc
gaactcaaagtgggattggatgatgcagatgtgttgatacggaaaatggatctcgaggca
agaagtttgcaaccgagtttaaaagcaacattacttgctaaactgagggaatacaaatca
gacctgaataagttgaagaaagaagtgaataaactgaccttgactagtgctaatcaagct
gcccatgatttagagtctggaatgatggatccacatgcagcttctgcaagtcaaagggaa
cgcttagcaatgtcaacagagagacttgatcagtcaagtgacaggatcagggagagcaga
aggattgccctagagactgaagaccttggtgtgtcaattctaggggatttgcaccaacag
cgtgaaacactgctacattcacataataagcttcacggtgtggatgatgccattgacaag
agcaagaagatcttgacttcgatgtctagaagaattagccgaaacaagtggattatgggc
tctgtgattggagcccttatcttggcaataattattattctgtatttcaagcttttccac
cattga
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