Solanum lycopersicum (tomato): 104647472
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Entry
104647472 CDS
T02665
Name
(RefSeq) nuclear transcription factor Y subunit B-6-like
KO
K08065
nuclear transcription Y subunit beta
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
104647472
Transcription factors [BR:
sly03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
104647472
BRITE hierarchy
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
104647472
NCBI-ProteinID:
XP_010321196
LinkDB
All DBs
Position
5:11862353..11875768
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AA seq
225 aa
AA seq
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MNNGYRVGSRKGRFRGRRSATPSLTLCTERGLRQAILLHPTNPSNLEDFICPFPEADRFM
PIENVVRIMRNILPPHAMISDESKVAVQECISEFIGFVTDQANDDCQHEQRNTIMAEDLL
SALKKFGFDDYIEPLTLYLHRYREVDGGADRSLKRESLLLKRPMVCPASGYSITPNHLPP
NLDMNHPPPMGDDFMKEDASNTSTSRCTVSTVDNEVNSLAKGGKE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaataatggttatcgtgttggttcaagaaaaggaagatttcgtggacgcagatccgct
accccttcacttaccctttgtacggagagaggcttgagacaggctattcttctccaccca
acaaatccttccaatttagaagatttcatatgcccctttccggaggcagaccgattcatg
ccaatagaaaacgtggtcagaatcatgcgcaatatccttcctccccatgccatgatatcc
gatgaatccaaagtagccgtccaagagtgtatctctgagttcataggttttgtaacagac
caagccaacgatgattgccagcatgagcagcgcaataccatcatggctgaagacttgctt
tctgccttgaaaaaatttggttttgatgactacattgaacccttgactttgtacctgcat
cgctatcgtgaggttgatggtggtgcggatagatccctgaaacgagagtctttgttgttg
aagcgtccaatggtttgtccagcttcaggctacagcatcacgcccaaccatctgccccct
aatcttgatatgaatcatccaccaccaatgggtgatgattttatgaaggaggatgcatca
aacacaagcacttctcggtgtacagtatctactgtggataatgaagttaattctcttgca
aaggggggtaaggagtga
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