Solanum lycopersicum (tomato): 104648546
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Entry
104648546 CDS
T02665
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
104648546
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
104648546
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
104648546
NCBI-ProteinID:
XP_010324270
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Position
7:complement(69635698..69640946)
Genome browser
AA seq
383 aa
AA seq
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MEGKRSNTRPLTLLRKIKGFTRSIVEDLARGRPPLIYIERFRNYCTDTSGNCSCSSGLST
GKEAISLKRECHARRLDVMLRVLLIVQQLLQENRHGSKRDIYYMHPTVFKEQSVVDRAIN
DICILLQCSRHNLNVVSVGNGLVMGWLRYVESGRKIDCISNPNTAYPIPVLVEEVDDIIS
VAQYVIVVEKESVFQRLANDQFCKRNRCIVITGRGYPDVPTRRFLRLLIDKLHLPVYGLV
DCDPYGFDILTTYKFGSLQMAYDATFLRVSEIQWLGVFVQDCDNYSIPQQCLLPLTAEDK
RKIEAMLPRCYLQREVPQWRFELELLLHKGVKFEIEALSVHSLTFLSHEYLPSKIHNGGL
KILSLNQMILHQNRLKTPISLNS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagcgttcaaacacgcggccactaacactcttaaggaaaatcaaaggattt
actcgttccattgttgaggatctcgctcgaggtaggccgccgctgatctacatcgaacgg
ttcagaaattactgtactgacacttctggaaattgctcttgcagctccggtttatcgact
ggcaaggaagctatttccttgaagagggaatgccatgcacgtaggcttgatgttatgttg
agagttctactgatagttcaacaacttctgcaagaaaacaggcatggatcaaaaagagac
atatattacatgcatcctactgtttttaaagaacaatctgttgttgatcgggcaattaat
gacatatgcatcctcttgcaatgcagtcggcataaccttaatgtggtgtctgttgggaat
ggattggtgatgggctggctgcggtatgtggaatctgggaggaaaattgactgcattagc
aatcctaacaccgcataccccattccagtccttgttgaagaagttgatgatattattagc
gttgctcaatacgttatagttgtggagaaggaatcagtattccagcgactagcaaatgat
cagttttgcaagaggaaccgttgcattgtgataacaggaaggggttatcctgatgttccc
acaaggaggtttctgcgtctcctcattgacaagctgcatttgcctgtgtacggcctggta
gattgtgatccatatggctttgacatcttaactacatacaaattcggttctttgcaaatg
gcttatgacgcaacatttctacgagtctctgagatacaatggcttggagtatttgtccag
gattgtgacaattatagcattccacagcaatgtctcctgcctttaactgctgaagataag
aggaaaatcgaagcaatgttacctagatgttatttgcaaagagaagtaccacaatggagg
tttgaactggagctgctgttgcacaaaggagttaagtttgagattgaagcattgtctgtg
cattcactcactttcttgtcccatgagtatctaccatcaaagatccacaatggaggattg
aaaattttgtcgctgaatcaaatgatactacatcagaatagattgaagaccccaattagc
cttaattcttaa
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