Solanum lycopersicum (tomato): 109121055
Help
Entry
109121055 CDS
T02665
Name
(RefSeq) putative two-component response regulator ARR20
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109121055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
109121055
Transcription factors [BR:
sly03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
109121055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Response_reg
KaiA_N
Motif
Other DBs
NCBI-GeneID:
109121055
NCBI-ProteinID:
XP_025888669
LinkDB
All DBs
Position
9:complement(4227743..4233401)
Genome browser
AA seq
477 aa
AA seq
DB search
MEGINNPMSSPYYGKIEHVHVMLVDNDKEFTKKMTDFLTFYEYKVVTVDTALAAMSMLKK
KQKIDVMILNVHPSNIYSFDLLAQAVVLDVITLVVYDELNELVAKKALDKGAYLSLKKPF
DEEILQYLWQIVLKRNMQREKAREGSEKNRDQITIDDIYNNDNINEGESQSNAINTVVRR
KYRTKWTDQLHDKFMKVVRQLGDGNCYPKKIFELMQVPGLTRIQIASHLQKCRRNNWRFK
KEQRYVCAPSGHESKFGAMPRLQTNVLNPQRNSDEIQKGLGHSYSTPNANNVFARGDNSI
QQQFYRPQLQVQPYSFDIDNPFNDSFLLAQNNVGMSSSQELEGSITGNTNYKPAWAFNNG
DHDHAQYAYNNLNLNAVYGTTYSNNKTVSGANTGNVQVNEYNANAENVAICSDNAMMSDT
YVGNVAINGVGETNTNFQQYIDESDIFATLCESDIEEADASEKEDCEAYYLNTEYLL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaagggataaacaatccaatgtcttctccttactatggaaagattgaacatgttcat
gtgatgctggtggataacgacaaagagtttaccaaaaagatgactgattttctgacgttt
tatgaatataaagttgtgacggttgatacggctttagcagcaatgtcaatgctcaagaaa
aaacaaaagattgacgtaatgatactcaatgttcatccatcgaacatttattcttttgac
ctcttagctcaagccgtggtgttggatgtaattacacttgttgtttatgatgaactcaac
gagctggtagcaaaaaaggctttggataaaggagcttatctttcccttaaaaagccattt
gatgaagaaattttgcaatacttatggcaaattgttttgaagaggaacatgcaacgagag
aaagcaagagaaggatcagaaaaaaatagagatcaaataactattgatgatatttataat
aatgataatatcaatgaaggagagagtcaaagcaatgctattaatacggttgttaggcga
aagtatcgaactaaatggactgatcaacttcatgacaaatttatgaaagttgtacgacag
cttggagatggaaattgttaccccaagaagatttttgagcttatgcaagtgcctggtctt
acaagaattcaaatcgctagccatctacagaaatgtcgtcgcaataattggagattcaaa
aaagagcaaagatatgtttgtgccccgtcaggacatgaaagtaaatttggggcaatgcct
cgacttcaaacaaatgtactgaatccgcaacgtaactcagatgaaatccaaaaaggccta
gggcattcatattcaactcctaatgccaacaacgtttttgctagaggagataattcaatt
caacaacaattctatcgcccacaacttcaggttcaaccctactctttcgatattgacaat
ccattcaatgactcatttttgttggcccaaaataatgttggaatgtcgagttcacaagaa
ctagaaggctcaattactgggaacactaattataaacctgcctgggcgtttaacaacgga
gatcatgatcatgctcaatatgcctataacaacttgaatctcaatgcggtctatgggaca
acatattcaaataacaaaacagtgtctggagcaaacactggaaatgtgcaagttaatgaa
tataatgccaatgcagaaaatgtggcaatatgttcagataacgcaatgatgtctgatact
tatgttggaaatgtggctattaatggagtaggagaaacaaacacaaattttcaacaatat
attgatgagtcagatatatttgcgacattatgtgagagtgacattgaagaggctgatgca
agtgagaaggaagattgcgaggcatattacctgaatacggaatacctcctttaa
DBGET
integrated database retrieval system
