KEGG   Solanum lycopersicum (tomato): 138336996
Entry
138336996         CDS       T02665                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03010  Ribosome
sly04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    138336996
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    138336996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sly03011]
    138336996
   04121 Ubiquitin system [BR:sly04121]
    138336996
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    138336996
Ribosome [BR:sly03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    138336996
  Archaea
    138336996
Ubiquitin system [BR:sly04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   138336996
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138336996
  Exosomal proteins of colorectal cancer cells
   138336996
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD Fer2_3 DUF2604 UBL_UBAC1 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 138336996
NCBI-ProteinID: XP_069153908
LinkDB
Position
1:54315883..54316596
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLTVLQFYKVDDTGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctagaggttgagtcttcc
gacaccatcgacaatgtgaaagccaagatccaggacaaggaagggattcccccagaccag
cagcgtttgattttcgccggaaagcagcttgaggatggtcgtactcttgccgactacaac
atccagaaggagtccactctccatctcgtgctccgtctccgtggtggtgctaagaagagg
aagaagaagacctacaccaagccaaagaagatcaagcacaagaagaagaaggttaagctc
actgtgttgcagttctataaggttgatgacactggaaaggttcagaggcttcgtaaggag
tgccctaatgctgagtgcggtgctggaacttttatggctaaccattttgaccgtcactac
tgtggtaagtgtgggctcacctacgtttacaacaaggctggaggcgattga

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