Solanum lycopersicum (tomato): 138339707
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Entry
138339707 CDS
T02665
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138339707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
138339707
03016 Transfer RNA biogenesis [BR:
sly03016
]
138339707
03012 Translation factors [BR:
sly03012
]
138339707
04131 Membrane trafficking [BR:
sly04131
]
138339707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
138339707
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
138339707
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
138339707
Translation factors [BR:
sly03012
]
Eukaryotic type
Elongation factors
138339707
Membrane trafficking [BR:
sly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
138339707
Exosome [BR:
sly04147
]
Exosomal proteins
Proteins found in most exosomes
138339707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
138339707
NCBI-ProteinID:
XP_069147724
LinkDB
All DBs
Position
11:59136279..59139477
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagattcatatcagcattgttgtcattggacatgtcgactctggaaag
tcgaccactactggtcacttgatctacaagcttggtggtattgacaagcgtgtgatcgag
aggtttgagaaagaagcagctgagatgaacaagaggtcattcaagtatgcatgggtgctt
gacaagcttaaggctgagcgtgaacgtggtattaccattgatattgccttgtggaagttt
gagaccacaaagtactactgcactgtgattgatgctcctggacacagagatttcatcaag
aacatgattactggtacctctcaggctgactgtgctgtcctcatcattgactccacaact
ggtggtttcgaagctggtatttccaaggatggacagacccgtgagcacgcattgcttgct
ttcacccttggtgtcaagcaaatgatttgctgctgtaacaagatggatgctaccaccccc
aagtactccaaggctaggtacgatgaaattgtcaaggaagtttcttcctacctcaagaaa
gtaggatacaaccctgacaaaatcccctttgtccccatctctggttttgaaggagacaac
atgattgagcgatcaaccaaccttgactggtacaagggcccaaccctacttgaggctctt
gaccagattaatgagcccaagaggccctcagacaagcccctccgtcttccacttcaggat
gtctacaagattggaggtattggaactgtacctgtcggtcgtgttgaaactggtgtgatt
aagcctggtatggttgtcacttttggtccaactggtctgaccactgaggttaaatctgtg
gagatgcaccacgaggctcttcaggaggcacttcctggtgacaatgttgggttcaacgtc
aagaacgttgcagttaaggatcttaagagaggttacgttgcctccaactccaaagatgac
ccagcgaagggtgctgctagcttcactgcccaagttatcatcatgaaccaccctggtcag
attggaaacggatatgccccagtgctcgactgccacacctcccacattgctgtcaagttt
gctgagatcttgaccaagattgacagacgttctggtaaggaacttgagaaggagcccaag
tttttgaagaatggtgatgccggtatggttaagatgattcccaccaagcccatggttgtt
gagacctttgctgagtacccaccattgggacgttttgccgtgagggacatgcgtcagact
gttgctgttggagttgtcaagaacgtcgacaagaaagaccctactggtgctaaagtcacc
aaggctgcccaaaagaagaagtga
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