Solanum lycopersicum (tomato): 138342137
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Entry
138342137 CDS
T02665
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138342137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
138342137
03051 Proteasome [BR:
sly03051
]
138342137
Membrane trafficking [BR:
sly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
138342137
Proteasome [BR:
sly03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
138342137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
Rad60-SLD_2
Dsc3_N
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
138342137
NCBI-ProteinID:
XP_069150429
LinkDB
All DBs
Position
2:complement(49256042..49258139)
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AA seq
290 aa
AA seq
DB search
MDGGDTTQTVKDNSGNIAVGGKTVTINIRCVNDFELSVQVSLDCTVGLFKSIISQPTDIP
VEEQKVIYNGRILKDDQTLKSCGLEADQTVHLIRGSAVAASASATNVVNPNANQDAPRVD
VPTKGGLFVRVGRGPLFSRLGRRGGSFGAGLPDFEQVQQHDSIMMREILNMPLVQDLVND
PEIICNFIVNSPQMREYVNLNPELPHIFNDPAIFLQIWEAARNELMHETIRTIQWSLSHT
ESSPEESNMLRHMYVDVQEPFLNATSMAGDTRNNSGTNPFVALFGAQEQF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggtgatactactcaaacggtgaaagacaattccggcaacatcgcagtcggt
ggtaaaacggtcaccatcaacatccgatgtgtcaatgactttgagttatctgttcaagtc
agcctcgattgcaccgtcggattattcaagtccatcatttcccagccgactgatatccct
gttgaggagcagaaagttatctataacggccggatcttaaaggatgatcaaaccctaaaa
agctgtggtctggaggcagaccaaacagttcatcttattcgaggttctgccgtagctgct
tctgctagtgcaaccaatgttgtaaatccaaatgctaatcaggatgctcccagggttgat
gttcccactaaaggggggctgtttgtcagggtcggtagaggtccactcttttctagactt
ggaagaagaggtggttcgtttggagctggacttccagattttgagcaggtccaacaacat
gactccatcatgatgagagagatattgaatatgcctctagttcaggatctagtgaatgac
ccagaaatcatctgcaactttatcgtgaacagtcctcaaatgcgagagtatgtgaatctt
aatcccgagcttccacacatattcaatgaccctgctatatttctccagatatgggaggct
gcacgtaatgaactcatgcatgagacgataagaactattcaatggtcattgagccacact
gaatcgtctcctgaggaatctaacatgctaaggcacatgtatgtggatgtccaagagcca
tttcttaatgcaacaagcatggctggagatacaagaaataattcagggacaaacccgttc
gtggctctttttggagcccaggaacaattttaa
DBGET
integrated database retrieval system
