Solanum lycopersicum (tomato): 138347806
Help
Entry
138347806 CDS
T02665
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138347806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
138347806
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138347806
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
138347806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
Motif
Other DBs
NCBI-GeneID:
138347806
NCBI-ProteinID:
XP_069152393
LinkDB
All DBs
Position
3:7826244..7829621
Genome browser
AA seq
375 aa
AA seq
DB search
MIRVNHSSSSEEEEEMARFSVGRDEHDNDEGGPCNSSTSVCKRRRTTARTFSRGVVIRQQ
EEVEERERERVVQEKVEEEAEEEDWGSESERNFRSSGDRRVPVRESEVLRENRSISGESM
YQNFEDSIINRSISVTLLDPDVLDCPICFEHLCVPVFQCGNGHIACAPCCIKIANKCPSC
CLPIGYNRCRAMENVLESLKVSCVNNRYGCKEILNLSKKTDHENACIYVPCFCPSHGCDF
IGTSAKVYAHFCEKHASSAEHISFNAVHPIYIEKDQRYIILQMRTEGILFIVNHASDRVG
SSINIICVGQARQKRRFSYKLVVTDGESSFKLESVAESVPNWSEDSPMKKFLVVPKDVVN
SSARLKLDVLIEEKE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgataagagtgaaccattcatctagcagcgaagaagaagaagaaatggcgagattttca
gttggaagagatgaacatgataatgatgaaggaggaccctgtaactccagcacatctgta
tgcaagagacggaggactaccgccagaactttctctcgcggcgtcgtaatccgtcaacaa
gaagaagtagaagaaagagaaagggaaagggttgttcaggaaaaagtagaggaagaggca
gaggaggaggattggggatcggaatctgagagaaatttccgatcgagcggtgatcggagg
gtgccagttcgtgaatccgaggttttaagagagaacaggtctatttctggtgagagcatg
tatcagaattttgaggattcaatcataaacaggtcaatttctgtgacgttattggatccg
gatgtgttggattgcccgatctgctttgaacatctctgtgttcctgtctttcagtgtggg
aatgggcacatagcatgtgccccttgctgcatcaagattgctaataagtgtccatcatgc
tgtttgccaattggatataaccgttgtcgagctatggagaatgttctagaatctctgaaa
gtgtcatgcgtgaacaataggtatggttgtaaggagattctgaatcttagtaagaaaact
gaccatgaaaatgcatgcatctatgtgccttgtttttgtccttcccatggctgtgacttt
ataggtacttcagcaaaggtatatgcacatttttgcgagaaacatgcttcttccgcagag
cacatttctttcaatgctgtccatccaatttatatagaaaaagaccaaaggtacataatt
cttcaaatgaggacagaaggtatactttttatcgtcaaccatgctagtgaccgtgttggg
agttctataaacatcatctgtgttggacaagctaggcagaagagaaggttctcatacaag
cttgtagtaacagatggggaaagttcttttaaactagaatccgttgcagagagtgtgcca
aactggtcagaagatagtcctatgaagaaattccttgtggtcccaaaagatgtcgttaat
tccagtgctcggctgaagttggatgttctcatagaagagaaggaatga
DBGET
integrated database retrieval system
