Solanum lycopersicum (tomato): 138348691
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Entry
138348691 CDS
T02665
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K22378
E3 ubiquitin-protein ligase RNF181 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
138348691
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138348691
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138348691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf_RING_Vps8
CRM1_repeat_2
FANCL_C
Motif
Other DBs
NCBI-GeneID:
138348691
NCBI-ProteinID:
XP_069154364
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All DBs
Position
5:21845040..21845381
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AA seq
113 aa
AA seq
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MSMALDEHIFDLDMALTMPEPDETCVVVNNSSNHKKETLMDVSITQIVGEMATIESVDDI
CSVCMQCFESSSSVGAKKVACGHVFHSHCLINWLSLHKSCPLCRFQVTLSSPH
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcattggatgaacacattttcgatctagatatggctctgacgatgccagag
cctgacgaaacttgtgtcgttgttaataatagcagcaaccacaagaaagaaacgttaatg
gatgtttcgatcactcaaattgttggtgaaatggctacaattgaatcagttgatgatatt
tgtagtgtgtgcatgcaatgtttcgaatcaagtagtagtgttggtgccaaaaaagtcgct
tgtggccatgttttccattcacattgtcttatcaactggctttcccttcacaagtcttgc
cctctttgccgctttcaagtcaccctctcatcccctcattga
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