Solanum lycopersicum (tomato): 543508
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Entry
543508 CDS
T02665
Symbol
ArcA1
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
543508 (ArcA1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
543508 (ArcA1)
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
543508 (ArcA1)
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
543508 (ArcA1)
Exosomal proteins of colorectal cancer cells
543508 (ArcA1)
Exosomal proteins of bladder cancer cells
543508 (ArcA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SPT8
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_NWD2_C
PROPPIN
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_NUP159_NUP214
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
543508
NCBI-ProteinID:
NP_001233876
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All DBs
Position
6:45268095..45270807
Genome browser
AA seq
326 aa
AA seq
DB search
MSQESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSIIVWSLTKDGSQYGVPRRRL
TGHGHFVEDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSVDNRQ
IVSASRDKTIKLWNTLGECKYTIQEQDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWN
LTNCKLRSTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDAGSIIHT
LCFSPNRYWLCAATESSIKIWDLESKSIVVDLKVDLKQESEMFGTAATDSKTKVIYCTSL
SWSADGSTLFSGYTDGLIRVWGIGRY
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagaatcactagtcctccgcggtaccatgaaagcccacactgactgggtcact
gctattgcaaccccaattgacaactccgacatgattgtcacctcctccagggataagtcc
atcatcgtctggtctttgactaaagacggctcacaatacggtgtccctcgtcgccgtctt
accggacatggccatttcgttgaagatgtcgtgttgtcgtctgacggcatgtttgcactc
tccggttcatgggacggtgagctccgtttatgggatcttcaagctggaacaactgctcgt
cgtttcgttggacacactaaagatgttctctctgttgcattctctgttgacaaccgtcag
attgtctctgcttcccgtgacaagaccatcaagctatggaacacactcggtgagtgcaag
tacacaattcaggaacaggattcacactctgattgggtttcttgtgtccgttttagccca
aataatcttcagcccactattgtgtctggttcatgggatcgcactgtcaaaatctggaat
ctcaccaactgtaagctcaggtctactcttgcgggtcacagcgggtatgtgaatactgtg
gccgtgtccccagatggttcgttgtgtgctagcggagggaaagatggtgtcatattgcta
tgggatttggctgaagggaagaaactgtactctcttgatgctggctccattatccacacc
ctctgttttagcccgaataggtattggctctgtgctgctactgaatctagtatcaagatt
tgggatttggagagcaaaagcatcgtggttgatcttaaagttgatctgaaacaagagagt
gaaatgttcggaactgctgctaccgattccaaaaccaaggtcatatactgcaccagtttg
agctggagtgctgatggaagcacacttttcagtggctatacagatggtctgattagagtt
tggggaattggacgttattag
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