KEGG   Solanum lycopersicum (tomato): 543508
Entry
543508            CDS       T02665                                 
Symbol
ArcA1
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03010  Ribosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    543508 (ArcA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    543508 (ArcA1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    543508 (ArcA1)
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     543508 (ArcA1)
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   543508 (ArcA1)
  Exosomal proteins of colorectal cancer cells
   543508 (ArcA1)
  Exosomal proteins of bladder cancer cells
   543508 (ArcA1)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_SPT8 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_HPS5 CFAP251_N ASA1 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_DCAF12 TRM82_WD Beta-prop_ACSF4 Beta-prop_NWD2_C PROPPIN eIF2A Beta-prop_WDR75_2nd PAC11 Beta-prop_WDR19_1st Beta-prop_DCAF4 Tricorn_2nd Beta-prop_NUP159_NUP214 Cytochrom_D1 DUF7899 Beta-prop_pof12
Other DBs
NCBI-GeneID: 543508
NCBI-ProteinID: NP_001233876
LinkDB
Position
6:45268095..45270807
AA seq 326 aa
MSQESLVLRGTMKAHTDWVTAIATPIDNSDMIVTSSRDKSIIVWSLTKDGSQYGVPRRRL
TGHGHFVEDVVLSSDGMFALSGSWDGELRLWDLQAGTTARRFVGHTKDVLSVAFSVDNRQ
IVSASRDKTIKLWNTLGECKYTIQEQDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIWN
LTNCKLRSTLAGHSGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDAGSIIHT
LCFSPNRYWLCAATESSIKIWDLESKSIVVDLKVDLKQESEMFGTAATDSKTKVIYCTSL
SWSADGSTLFSGYTDGLIRVWGIGRY
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcgcaagaatcactagtcctccgcggtaccatgaaagcccacactgactgggtcact
gctattgcaaccccaattgacaactccgacatgattgtcacctcctccagggataagtcc
atcatcgtctggtctttgactaaagacggctcacaatacggtgtccctcgtcgccgtctt
accggacatggccatttcgttgaagatgtcgtgttgtcgtctgacggcatgtttgcactc
tccggttcatgggacggtgagctccgtttatgggatcttcaagctggaacaactgctcgt
cgtttcgttggacacactaaagatgttctctctgttgcattctctgttgacaaccgtcag
attgtctctgcttcccgtgacaagaccatcaagctatggaacacactcggtgagtgcaag
tacacaattcaggaacaggattcacactctgattgggtttcttgtgtccgttttagccca
aataatcttcagcccactattgtgtctggttcatgggatcgcactgtcaaaatctggaat
ctcaccaactgtaagctcaggtctactcttgcgggtcacagcgggtatgtgaatactgtg
gccgtgtccccagatggttcgttgtgtgctagcggagggaaagatggtgtcatattgcta
tgggatttggctgaagggaagaaactgtactctcttgatgctggctccattatccacacc
ctctgttttagcccgaataggtattggctctgtgctgctactgaatctagtatcaagatt
tgggatttggagagcaaaagcatcgtggttgatcttaaagttgatctgaaacaagagagt
gaaatgttcggaactgctgctaccgattccaaaaccaaggtcatatactgcaccagtttg
agctggagtgctgatggaagcacacttttcagtggctatacagatggtctgattagagtt
tggggaattggacgttattag

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