Solanum lycopersicum (tomato): 543755
Help
Entry
543755 CDS
T02665
Symbol
ats1
Name
(RefSeq) putative asparaginyl-tRNA synthetase
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
543755 (ats1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sly01007
]
543755 (ats1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
543755 (ats1)
Enzymes [BR:
sly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
543755 (ats1)
Amino acid related enzymes [BR:
sly01007
]
Aminoacyl-tRNA synthetase
Class II (A)
543755 (ats1)
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
543755 (ats1)
Prokaryotic type
543755 (ats1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
CEP135_TSGA10_CC
T4SS_LegC2C7
Leu_zip
Sec10_N
TBCA
CEP128
Motif
Other DBs
NCBI-GeneID:
543755
NCBI-ProteinID:
NP_001304912
LinkDB
All DBs
Position
10:complement(61075020..61079457)
Genome browser
AA seq
580 aa
AA seq
DB search
MSVDSAPPVEKLTLTDVVEEARFSQRVPICSIVGRTDGGAGLAGNVVKIGGWVKTGREQG
KGSFAFLEVNDGSCPGNLQVIVDASVHKLGDLVLTGTCVHVEGELKVPPEGAKQKVELRV
QKVISVGTVDAAKYPLPKTKLTLEFLRDVVHLRSRTNTISAVARIRNALAYATHTFFQNN
GFLYIHTPIITTSDCEGAGEMFQVTSLISEAEKLEKELKENPAPSESDTQAAEKLAKEKG
EVVAQLKASKASMDKTDPNIADINKKISAAVAELQRAKENLLKLQERSKLGERYRLSAGI
PKKDGKIDYSEDFFGRQAFLTVSGQLQVETYACALSSVYTFGPTFRAEQSHTTRHLAEFW
MVEPEIAFADIQDDMNCAEAYVKFLCQWLLDHCLDDMEFMTKFVDKDALSRLRMVASSNC
HRITYTEAIDILEVAAKVKKFENKVEWGIDLASEHERYLTEEHFKAPVIVFNYPKGIKAF
YMKVNEDNKTVAAMDLLVPKVGELIGGSQREENYEVLRSRILDLGLPLEPYEWYLDLRRY
GTVKHSGFGLGFERMILFATGIENIRDVIPFPRYPGRADL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgattcagcgccgccggtggaaaaactcaccctaaccgacgtcgtagaggag
gcgagattctctcaacgcgtcccgatctgttcaatcgtcggccgtaccgacggaggagct
ggactcgccggaaatgttgtcaaaatcggtggttgggtcaaaacaggaagagaacagggc
aagggttcattcgctttcctcgaagtgaatgacggttcatgcccagggaatcttcaagtg
atcgttgatgcttcagttcataagcttggtgatttggtacttactggtacttgtgtacat
gtggaaggtgaattgaaggttcctcctgaaggtgcgaagcagaaagttgagcttcgtgtt
cagaaggttatatctgtgggtactgttgatgctgctaagtatccattgccgaagactaag
ttgacgcttgagtttttaagggatgttgttcatcttcgatcccgaacgaacactatttct
gctgttgctagaatccgtaatgccttagcttatgccacccatacattcttccaaaacaat
gggtttctttatatccacaccccaataatcacaacaagtgattgtgagggtgctggtgag
atgttccaagttactagtttgattagtgaagctgaaaagttggagaaggagctgaaagag
aatcctgctccttcagaatctgacactcaagctgctgagaaactcgccaaagagaaaggt
gaggtagttgctcagctaaaagctagtaaggcgagcatggacaaaactgatcccaatatt
gcggacatcaacaagaaaatcagtgctgcagttgccgagctacaacgagctaaagagaat
ctcctgaagttgcaagagagatctaaattgggagaaagatacagactctctgctggtatt
cctaaaaaggatggaaagattgattactctgaggatttttttggacgacaagctttcttg
acagtgtctggccaactccaagttgaaacctatgcatgtgcactttctagtgtgtatact
tttggaccaacttttcgagctgaacagtcccacactactcggcatcttgcagagttctgg
atggtggagcctgaaattgcttttgctgatatccaggatgatatgaattgtgctgaggcg
tatgtgaagtttctgtgtcagtggttacttgaccattgccttgatgacatggaatttatg
actaaatttgtagataaagatgctctgagtagacttagaatggttgcctcatcgaactgc
catcggataacttatacagaagccatagatattcttgaggtagcagccaaagtgaagaaa
tttgaaaataaagtagagtgggggattgacttagcatctgaacatgaaagatatttgacc
gaagagcattttaaggcacctgttattgtgttcaactatccaaaagggataaaagcattt
tacatgaaggtgaatgaagacaacaagacagttgctgccatggatctgctagtaccaaag
gtgggagaactaattggaggaagccaaagagaagagaattatgaagtcctcagatcaagg
atactggatctgggtctaccactagagccatatgagtggtatctggacctgaggcgctat
ggtactgtaaagcacagtggtttcggtttaggctttgaacgaatgattctgtttgccact
gggatagaaaacattcgggatgtcattcccttccctagatatccagggagagccgatctt
taa
DBGET
integrated database retrieval system
