Solanum lycopersicum (tomato): 543870
Help
Entry
543870 CDS
T02665
Name
(RefSeq) SNF1-related protein kinase
KO
K07198
5'-AMP-activated protein kinase, catalytic alpha subunit [EC:
2.7.11.31
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sly01001
]
543870
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
543870
03029 Mitochondrial biogenesis [BR:
sly03029
]
543870
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.31 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase
543870
Protein kinases [BR:
sly01001
]
Serine/threonine kinases: CAMK group
CAMKL family
543870
Membrane trafficking [BR:
sly04131
]
Autophagy
Other autophagy associated proteins
Others
543870
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
543870
Mitophagy factors
Other mitophagy factors
543870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
KA1
Kinase-like
ABC1
UBA_2
UBA
SLIDE
AdenylateSensor
Shikimate_DH
UBA_SIK3
Motif
Other DBs
NCBI-GeneID:
543870
NCBI-ProteinID:
NP_001234325
UniProt:
Q6XNM3
LinkDB
All DBs
Position
3:62196827..62201404
Genome browser
AA seq
504 aa
AA seq
DB search
MSSRGGGIAESPYLRNYRVGKTLGHGSFGKVKIAEHLLTGHKVAIKILNRRKMKTPDMEE
KLRREIKICRLFVHPHVIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARKF
FQQIIAGVEYCHRNMVVHRDLKPENLLLDARRNVKIADFGLGNIMRDGHFLKTSCGSPNY
AAPEVVSGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKSGVYTLPSHLSP
LARDLIPRMLIVDPMKRISVADIRQHQWFKIHLPRYLAVPPPDARQHLKKLDEEILQQVT
RMGLDRDQLLDSLQKRIQDDATVAYYLLYDNRSMASSGYLGAEFQESVDGYSSGLFPNLD
LQLSSGNGVSEESLRRPFRKEKTWLVGLQSPANPKEIMNQVLGTLLELNVRWKKIGHYNM
KCLWCHDLHLHSMASNHMNDDDHFISNATAISTHLQPLPTVKFEMQLYKTEDEKYLLDLQ
RISGPQFLFLDFCAGFIRQLEGPQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagaggtggtggaattgctgaatctccttatttaaggaactacagggttgga
aaaactcttggacatggatcctttggtaaagttaaaattgctgagcatttgctcactggg
cataaagtggcgatcaaaatccttaatcggcggaaaatgaagactccagacatggaagaa
aaactgaggagagaaataaaaatatgtagattatttgtgcatccacatgtcatacgactc
tatgaagtgatagagacgccaacagatatatatgttgtaatggagtatgtcaagtctggg
gagctctttgattatattgtagaaaaaggaaggttacaggaagatgaagctcggaaattt
tttcagcagattattgctggtgtggagtactgccataggaatatggtggttcatcgggac
cttaagcctgagaatctgcttttggatgcaagacgcaatgtaaagatagcagattttggc
ttgggaaacattatgcgagatggccattttctgaagactagttgtggaagtccaaattat
gcagctcctgaggttgtatctgggaaactatatgctggtcctgaggtagatgtttggagt
tgtggcgtaatcttatatgctcttctttgtggtacacttcctttcgatgatgagaacatt
cccaaccttttcaagaaaataaagagtggagtctacacccttccaagtcacctgtcacct
ttagctagggatttgataccaaggatgctgattgttgatcctatgaagcgcatatcggta
gctgatattcgtcaacaccagtggttcaaaattcatcttcctcggtatttggcagttcct
ccacctgatgctaggcaacatcttaaaaagcttgatgaggaaattctccagcaagtaact
aggatggggcttgatagggaccagttgcttgattctttacaaaagagaatacaagatgat
gctactgttgcatactatctgctgtacgataaccgttccatggcttccagtgggtatcta
ggagctgagtttcaggaatctgtggatggttattcctctggattgtttccaaatcttgac
ctacagctgtctagtgggaacggagtttctgaagagagtttgagacgcccatttcgcaaa
gagaaaacgtggctagttggacttcagtctccagcaaatccaaaggagatcatgaatcag
gttcttgggaccctgctagaactaaatgttcgatggaaaaaaattgggcactataatatg
aagtgtttatggtgtcatgatcttcatcttcatagtatggccagcaatcatatgaatgat
gatgatcattttattagtaatgcaactgccataagtacacatttacagccactacctact
gtgaagtttgaaatgcagctgtacaaaactgaggatgagaaatatctgcttgatctccaa
agaattagtggtccgcagttcctcttcctggatttctgtgctggtttcattaggcagcta
gaggggccacaatga
DBGET
integrated database retrieval system
