Solanum lycopersicum (tomato): 544003
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Entry
544003 CDS
T02665
Symbol
RAD51
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03440
Homologous recombination
sly03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
544003 (RAD51)
03460 Fanconi anemia pathway
544003 (RAD51)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
544003 (RAD51)
04121 Ubiquitin system [BR:
sly04121
]
544003 (RAD51)
03400 DNA repair and recombination proteins [BR:
sly03400
]
544003 (RAD51)
Membrane trafficking [BR:
sly04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
544003 (RAD51)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
544003 (RAD51)
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
544003 (RAD51)
RecA family proteins
544003 (RAD51)
FA (Fanconi anemia) pathway
Other FA pathway factors
544003 (RAD51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
AF1548-like_C
HhH-GPD
HHH
ATPase_2
Motif
Other DBs
NCBI-GeneID:
544003
NCBI-ProteinID:
NP_001233788
UniProt:
Q40134
LinkDB
All DBs
Position
7:complement(9798654..9802278)
Genome browser
AA seq
342 aa
AA seq
DB search
MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR
KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI
ETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
YGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHAST
TRLALRKGRAEERICKVVSSPCLAEAEARFQISVEGVTDVKD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagcacaggaatcagaagtcgatgcaagaccaaaatgatgaaatcgaggat
gttcaacacggcccttttccagttgaacaacttcaggcatcagggattgcagctctagat
gtaaaaaaactcaaggatgctggtctatgtacagttgaatctgttgtttatgctccaaga
aaggaacttctgcagataaaaggaattagtgaagctaaagttgacaagattattgaggca
gcttcaaaattagtgcctttgggattcactagtgccagccaactccatgcacagaggctt
gaaatcatacagataacttctggatcgaaagaacttgacaagatattagaaggaggaatc
gaaactggatctattactgaaatttacggagagttccgatgtggaaagactcagctgtgt
cacacactatgcgtgacttgtcaacttccattagatcagggaggtggtgaagggaaagca
atgtacattgatgctgagggtactttcagaccacaaagacttttacaaattgcagacagg
tatggattgaatggtcctgatgtcctggagaatgtagcctatgctcgagcttataatacc
gatcatcaatcaagacttttgcttgaggcagcctcaatgatggtggagaccaggtttgct
ctcatgattgtggacagtgctactgccctttatagaactgacttctctgggagaggagag
ttgtctgccaggcagatgcatcttgcaaagtttctgagaagccttcagaagttagcagat
gagtttggtgttgctgttgttattacgaaccaagttgttgctcaagtggatggttctgct
gtatttgctgggcctcaaataaaacccattggtggcaacatcatggcacatgcttctacg
acgagactagctctgaggaagggtagggccgaggagcggatttgtaaagtagtcagttcg
ccatgcttagctgaagcagaagcaagatttcaaatttctgttgaaggagtcactgatgta
aaggactaa
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