KEGG   Solanum lycopersicum (tomato): 544003
Entry
544003            CDS       T02665                                 
Symbol
RAD51
Name
(RefSeq) DNA repair protein RAD51 homolog
  KO
K04482  DNA repair protein RAD51
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03440  Homologous recombination
sly03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    544003 (RAD51)
   03460 Fanconi anemia pathway
    544003 (RAD51)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    544003 (RAD51)
   04121 Ubiquitin system [BR:sly04121]
    544003 (RAD51)
   03400 DNA repair and recombination proteins [BR:sly03400]
    544003 (RAD51)
Membrane trafficking [BR:sly04131]
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    544003 (RAD51)
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    544003 (RAD51)
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     544003 (RAD51)
    RecA family proteins
     544003 (RAD51)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     544003 (RAD51)
SSDB
Motif
Pfam: Rad51 RecA AAA_25 HHH_5 ATPase DnaB_C AAA_22 AF1548-like_C HhH-GPD HHH ATPase_2
Other DBs
NCBI-GeneID: 544003
NCBI-ProteinID: NP_001233788
UniProt: Q40134
LinkDB
Position
7:complement(9798654..9802278)
AA seq 342 aa
MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR
KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI
ETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
YGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHAST
TRLALRKGRAEERICKVVSSPCLAEAEARFQISVEGVTDVKD
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggagcagcagcacaggaatcagaagtcgatgcaagaccaaaatgatgaaatcgaggat
gttcaacacggcccttttccagttgaacaacttcaggcatcagggattgcagctctagat
gtaaaaaaactcaaggatgctggtctatgtacagttgaatctgttgtttatgctccaaga
aaggaacttctgcagataaaaggaattagtgaagctaaagttgacaagattattgaggca
gcttcaaaattagtgcctttgggattcactagtgccagccaactccatgcacagaggctt
gaaatcatacagataacttctggatcgaaagaacttgacaagatattagaaggaggaatc
gaaactggatctattactgaaatttacggagagttccgatgtggaaagactcagctgtgt
cacacactatgcgtgacttgtcaacttccattagatcagggaggtggtgaagggaaagca
atgtacattgatgctgagggtactttcagaccacaaagacttttacaaattgcagacagg
tatggattgaatggtcctgatgtcctggagaatgtagcctatgctcgagcttataatacc
gatcatcaatcaagacttttgcttgaggcagcctcaatgatggtggagaccaggtttgct
ctcatgattgtggacagtgctactgccctttatagaactgacttctctgggagaggagag
ttgtctgccaggcagatgcatcttgcaaagtttctgagaagccttcagaagttagcagat
gagtttggtgttgctgttgttattacgaaccaagttgttgctcaagtggatggttctgct
gtatttgctgggcctcaaataaaacccattggtggcaacatcatggcacatgcttctacg
acgagactagctctgaggaagggtagggccgaggagcggatttgtaaagtagtcagttcg
ccatgcttagctgaagcagaagcaagatttcaaatttctgttgaaggagtcactgatgta
aaggactaa

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