Solanum lycopersicum (tomato): 544004
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Entry
544004 CDS
T02665
Symbol
TAPG1
Name
(RefSeq) polygalacturonase 1 precursor
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
544004 (TAPG1)
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
544004 (TAPG1)
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
544004
NCBI-ProteinID:
NP_001233795
UniProt:
O22311
Q40135
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Position
2:53914776..53916523
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AA seq
392 aa
AA seq
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MSPFAIFFLLLINSSLAANTNIYNVQNYGAKSDGKTDSSKAFLNAWAAACASNKPSTINV
PIGKYLIHNANFNGQTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNGLSIYGGT
FDGQAAALWACKNSNNKNCPDGTTALTFYNSNNIIMSGVKVQNSQKFQILVDGCHNVKLQ
GVKVSAPGNSPNTDGIHVKSSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHGI
SIGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNP
IIIDQNYCPNHQSCPHKGSGIKISDVTYQDIHGTSATEVAVKLDCSKSNPCSGITLEDVN
LSYQNQQTEASCVNARGRVSGLQKPTNCLLKS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtccctttgctattttcttcctcttgttaattaactcatcattagcagcaaataca
aatatttacaatgtccaaaattatggagcaaaatccgatggaaaaactgattcatcaaaa
gcctttttgaatgcatgggcagcagcctgtgcttctaataaaccttccactattaatgtg
ccaattggaaaatacttaattcacaatgcaaacttcaatggacaaacatgcaagagcaaa
gctattaccatgcacattgatgggactctcttagctccatctgattataatgtgattggc
aatgaagaaaattggataaaatttgaaaaagtcaatggcctttccatctatggtggtacc
tttgatggtcaagctgctgctctttgggcttgcaagaactccaacaacaagaattgccct
gatggaactacggcattaactttttacaactcaaacaacattataatgagcggagtaaaa
gtacaaaatagtcaaaagtttcaaatattggtagacggatgtcataacgtaaagcttcaa
ggagtaaaggtatccgctccaggaaatagtcccaacacagatggaattcatgtaaaatca
tcatctggagttagtattatgaaatcacaaattggtactggagatgattgtatctctatt
ggccctggaacttcaaacttatggattgaaggcattgcttgtggccctggccatggaata
agcattggaagcttaggctggaaacaacaagagttaggagtccaaaatgtgacagttaag
actgtgactttcagtggaacaacaaatggtgtgagagttaaaacttgggcaaggcctagc
aatggctttgttagaaatgttctgtttcaacatattgttatggttaatgttaaaaaccca
atcatcatagatcaaaattattgccctaatcatcaaagttgtcctcataagggctcgggt
ataaagataagtgatgtgacatatcaagatatacatggaacatcggctacagaagttgca
gtgaaacttgattgtagcaaaagtaatccatgtagcggcataacacttgaagatgtgaat
cttagttatcaaaatcagcagactgaagcttcatgtgttaatgccagaggaagagtttct
ggtttacaaaaacctaccaattgcctattaaaaagttag
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