Solanum lycopersicum (tomato): 544011
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Entry
544011 CDS
T02665
Symbol
Rab1B
Name
(RefSeq) small GTP-binding protein
KO
K07874
Ras-related protein Rab-1A
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
544011 (Rab1B)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
544011 (Rab1B)
04031 GTP-binding proteins [BR:
sly04031
]
544011 (Rab1B)
Membrane trafficking [BR:
sly04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
544011 (Rab1B)
Autophagy
Other autophagy associated proteins
544011 (Rab1B)
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
544011 (Rab1B)
Exosomal proteins of other body fluids (saliva and urine)
544011 (Rab1B)
Exosomal proteins of colorectal cancer cells
544011 (Rab1B)
GTP-binding proteins [BR:
sly04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
544011 (Rab1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
SRPRB
RsgA_GTPase
FeoB_N
LANC_like
Dioxygenase_N
Motif
Other DBs
NCBI-GeneID:
544011
NCBI-ProteinID:
NP_001233828
UniProt:
Q41339
LinkDB
All DBs
Position
1:87991269..87996155
Genome browser
AA seq
202 aa
AA seq
DB search
MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANESVCKLLVG
NKCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAGA
KRTGSTVQIKGQPIEQKGNCCG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaatacgattacttgttcaaactgttgttgatcggcgattcttctgtcggc
aaatcctgtcttcttctcagattcgccgatgattcgtatgttgacagttacattagcacc
attggagttgatttcaaaattaggactgtggagcaggatggaaagacaatcaagctgcaa
atttgggatactgctggacaggaacgtttccggactataacaagcagttactacagggga
gcgcatgggattattattgtttatgatgtaactgaaatggagagcttcaacaatgtcaag
caatggctgaatgaaattgacagatatgcaaatgagagtgtgtgcaagcttctcgtggga
aacaaatgcgatttggtagaaaacaaggtcgtggacacacagatgggaaaggctctggca
gatgaactaggtatccctttccttgagacaagtgcaaaagactccatcaacgtggagcag
gctttcttaacgatggctggagagataaagaaaaaaatgggtaaccaaccagctggagca
aagaggacaggtagcactgttcaaatcaagggacaaccaattgagcagaagggcaactgt
tgtggttaa
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integrated database retrieval system
