Solanum lycopersicum (tomato): 544055
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Entry
544055 CDS
T02665
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
544055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
544055
03016 Transfer RNA biogenesis [BR:
sly03016
]
544055
03012 Translation factors [BR:
sly03012
]
544055
04131 Membrane trafficking [BR:
sly04131
]
544055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
544055
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
544055
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
544055
Translation factors [BR:
sly03012
]
Eukaryotic type
Elongation factors
544055
Membrane trafficking [BR:
sly04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
544055
Exosome [BR:
sly04147
]
Exosomal proteins
Proteins found in most exosomes
544055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
544055
NCBI-ProteinID:
NP_001234035
UniProt:
P17786
LinkDB
All DBs
Position
6:56480..59034
Genome browser
AA seq
448 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagattcacatcagcatcgtggtcattggtcatgttgactctggaaag
tcgactaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggcagaacgtgagcgtggtatcaccattgatattgctttgtggaagttt
gagaccactaagtactactgcactgttattgatgcccccggccacagggatttcatcaag
aacatgatcactggtacctctcaggctgactgtgctgttctcattattgactccactact
ggtggttttgaagctggtatctccaaagatggtcagacccgtgaacatgcattgcttgct
ttcacccttggtgtcaagcaaatgatctgctgctgtaacaagatggatgctaccaccccc
aagtactccaaggctaggtatgatgaaatcgtgaaggaagtttcttcctacctcaagaag
gttggttacaaccctgacaaaatcccctttgttccaatctctggttttgaaggagacaac
atgattgagaggtctaccaacctcgactggtacaagggaccaaccctccttgaggctctt
gaccagattaatgagcccaagaggccatcagacaagcccctccgtcttccacttcaggac
gtttacaagattggtggaattggaactgtccccgttggtcgtgttgaaactggtgtgatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgta
gagatgcaccacgaagctctccaggaggcactccctggtgacaatgttgggttcaatgtt
aagaatgttgctgttaaggatcttaagcgtggttatgttgcctcaaactccaaggatgac
ccagccaagggggcagccagcttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaacggatatgcccctgtgctcgactgtcacacttcacacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaacggtgatgctggtatggttaagatgattcccaccaagcccatggttgtt
gagacctttgctgaataccctccattgggtcgttttgctgtgagggacatgaggcagact
gttgctgtcggtgttgtcaagaatgttgacaagaaggacccaactggtgccaaggtgacc
aaggctgcccagaagaaggggaagtga
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