Solanum lycopersicum (tomato): 544098
Help
Entry
544098 CDS
T02665
Symbol
RNALE
Name
(RefSeq) ribonuclease T2 precursor
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
544098 (RNALE)
Enzymes [BR:
sly01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
544098 (RNALE)
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
544098 (RNALE)
Prokaryotic type
544098 (RNALE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
544098
NCBI-ProteinID:
NP_001234195
UniProt:
P80022
Q6A3R1
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(2645769..2647376)
Genome browser
AA seq
230 aa
AA seq
DB search
MASNSAFSLFLILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAAD
FGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWE
KHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGY
TPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECPIFPGGKCGTSIEFPTF
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaattcagccttttctctgttcttgattttgttaattattacacaatgttta
tcagtcctcaatgctgctaaagattttgactttttctactttgttcaacagtggccaggg
tcatactgtgacacaaaacaaagttgttgttaccctacaactggaaaaccagcagcagat
tttggaattcatggactttggcctaataataatgatgggacttatccatcaaattgtgat
ccaaacagtccttatgaccaatctcagatttctgacttaattagtagtatgcaacaaaat
tggccaacactagcgtgcccaagtggtagtggctcaacattttggtcacatgaatgggaa
aagcatggcacttgtgctgaatccgttctcacaaaccaacacgcttattttaagaaggct
cttgatctcaagaatcaaattgatcttttgtcaattcttcaaggtgctgacattcatcct
gacggcgaatcttatgacctggtcaatattagaaatgcaattaaaagcgcgattggatat
actccttggatccaatgtaatgtagaccagtcgggtaacagtcagctataccaggtttac
atttgtgttgatggctcgggttcaagtctcattgagtgccctattttccctggagggaaa
tgtggcacaagcattgagttcccaacattttaa
DBGET
integrated database retrieval system
