Solanum lycopersicum (tomato): 544188
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Entry
544188 CDS
T02665
Symbol
TAPG2
Name
(RefSeq) abscission polygalacturonase precursor
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
544188 (TAPG2)
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
544188 (TAPG2)
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
544188
NCBI-ProteinID:
NP_001234533
UniProt:
Q96487
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Position
2:53920163..53921779
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AA seq
392 aa
AA seq
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MSPLAIFFLFLINSSLAANTNIYDVQNYGAKSDGKTDSSKAFLNAWAAACASNTPSTINV
PAGKYLIHNANFNGQTCKSKAITMHIDGTLLAPSDYNVIGNEENWIKFEKVNALSIYSGT
FDGQGASLWACKNPNNKNCPDGTTALTFYNSNNIIMSGVTVQNSQKFQILVDGCRNVKLQ
GVKVSAPGNSPNTDGIHVKLSSGVSIINSHIGTGDDCISIGPGTSNLWIEGIACGPGHGI
SIGSLGWKQQELGVQNVTVKTVTFSGTTNGVRVKTWARPSNGFVRNILFQHIVMVNVKNP
IIIDQNYCPNHESCPHQGSGIKISDITYQDIHGTSATKIAVKLDCSKTNPCSGITLEGVN
LSYQNQQTEASCVNARGRVSGLQKTTNCLLEN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcaattttcttcctctttttaatcaactcatcattagcagcaaatacc
aatatttacgatgtccaaaattatggagcaaaatccgatggaaaaactgattcatcaaaa
gcctttttgaatgcatgggcagcagcctgtgcttctaataccccttccactattaatgta
ccagctggaaaatacttaattcacaatgcaaacttcaatggacaaacatgcaagagcaaa
gctattaccatgcacattgatgggactctcttagctccatctgattataatgtgattggc
aatgaagaaaattggataaaatttgaaaaagtcaatgccctttccatctatagtggtacc
tttgatggtcaaggtgcttctctttgggcttgcaagaaccccaacaacaagaattgccct
gatggaactacggcattgactttttacaactcaaacaacattataatgagtggagtaaca
gtacaaaatagccaaaagtttcaaattttggtagacggatgtcgtaacgtaaagcttcaa
ggagtaaaggtatcagctccaggaaatagtcccaacacagatggaattcatgtaaaatta
tcatctggagttagcattataaactcacatattggtactggagacgattgcatctctatt
ggccctggaacttcaaacttatggattgaaggcattgcttgtggccctggccatggaata
agcattggaagcttaggctggaaacaacaagagttgggagtccaaaatgtgacagttaag
actgtgacttttagtggaacaacaaatggtgtgagagtgaaaacatgggcaaggccaagc
aatggctttgttagaaatattctgtttcaacatattgttatggttaatgttaaaaaccca
atcatcatagatcaaaattattgtcctaatcatgaaagttgtcctcatcagggttctggt
ataaagataagcgatataacatatcaagacatacatggaacatcagctacaaagatcgca
gtaaaacttgattgtagcaaaactaatccgtgcagcggcataacacttgaaggtgtgaat
cttagttatcaaaatcagcagactgaagcttcatgtgttaatgcaagaggaagagtttct
ggtttacaaaaaactaccaattgcctattggaaaattag
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