Solanum lycopersicum (tomato): 544219
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Entry
544219 CDS
T02665
Symbol
CRY1a
Name
(RefSeq) cryptochrome 1
KO
K12118
cryptochrome 1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
544219 (CRY1a)
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
544219
NCBI-ProteinID:
NP_001234667
UniProt:
Q9XHD8
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Position
4:61982862..61988099
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AA seq
679 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIYAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLKSLGTSLITKRSTDSISSLLEVVKSTGATQLFFNHLYDPISLVRDHRTKEILT
AQGISVRSFNADLLYEPWEVNDDEGRPFTTFSAFWEKCLSMPYDPEAPLLPPKRIISGDA
SRCPSDNLVFEDESEKGSNALLARAWSPGWSNADKALTTFVNGPLLEYSQNRRKADSATT
SFLSPHLHFGEVSVRKVFHFVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLRYFPWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNPQFVGYKCD
PHGEYVRRWLPELARLPTEWIHHPWNAPESVLEAAGIELGSNYPLPIVEIDSAKVRLEQA
LSQMWQNDAAARAAIENGMEEGHGDSADSPIAFPQAMHMEMDHEPVRNNPVIVTVRRYED
QMVPSMTSSLFRAEDEENSVDIRNSVVESRAEVPTDINVAEVHRRDTRDQAVMQTARTNA
TPHFNFAVGRRNSEDSTAESSSSTRERDGGVVPTWSPSSSNYSDQYVGDDNGIGTSSSYL
QRHPQSHQLMNWQRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgtagcatagtatggtttagaagggatctgagagtggaagataac
cctgctttggctgctggagttagagcaggggcagttattgctgtgtttatttatgctcct
gaagaagaagggcattattatcctggtagagtttcaagatggtggcttaagcagagtttg
gctcatcttgattcatctttgaagagtcttggaacctcccttattacaaagagatctact
gatagtatttcttctcttcttgaagttgttaaatctactggtgctactcagctcttcttc
aatcatttgtatgatcctatttcacttgtgagagatcatcgcacaaaagaaatcttaaca
gctcaaggtatatcagtgcgttcctttaatgctgatttgctctatgaaccatgggaagtt
aatgacgatgaaggtcgcccgttcacaacattttctgctttttgggagaaatgccttagc
atgccttatgatccagaagctccacttcttcctcccaaaaggattatatctggtgatgca
tcaagatgcccttcagacaacttggtatttgaagatgaatcagagaaaggaagcaatgca
cttcttgctcgggcatggtcacctggctggagtaatgctgataaagcactaactactttc
gttaatggaccattacttgagtactcgcagaaccgtcggaaagctgatagtgcaacaaca
tcctttctatctccacatttacattttggggaagtcagtgttcgtaaggtattccatttt
gttcgcatcaagcaagttctctgggccaatgaaggaaataaagctggtgaagagagtgtt
aatttgttccttaagtccattgggctgagggagtactcaagatacatgagttttaatcat
ccttatagccatgaaaggccccttcttggtcacctaaggtacttcccatgggtagtggat
gaaggctactttaaggcatggagacaaggtagaacaggttatcctttggttgatgctggt
atgagagagttatgggcaactggttggcttcatgatcgtatccgagtcgtggtatctagt
ttctttgtgaaggttctgcagcttccatggaggtgggggatgaagtatttttgggacaca
ttgttagatgcagatcttgagagtgatgctcttggttggcaatatatctctggtacccta
cctgatggtcgtgagcttgatcggattgataatccacagtttgtgggatacaagtgtgac
cctcatggggaatatgtccggcggtggcttcctgaacttgctaggctgcccaccgaatgg
atacaccatccatggaatgcaccagaatctgtgcttgaagctgctggcattgagctgggt
tccaattatcctcttcctatagttgaaattgattcagcaaaagttagactagaacaagcc
ctatcacaaatgtggcagaatgatgcagctgcaagagctgcgattgagaatggtatggaa
gaaggacatggtgactctgctgactccccaatagcatttcctcaggccatgcatatggaa
atggaccatgaaccagtcaggaacaaccctgtaatagttactgttcgacgctatgaagat
caaatggtgccaagcatgacgtcatctttgttcagagctgaagatgaagagaactccgtg
gacattaggaattcagttgtggaaagtagggcagaagttccaacagacatcaatgtagct
gaagttcataggagagacacgcgtgaccaagccgtcatgcaaactgctcgaaccaatgct
accccacattttaattttgcggtaggtaggaggaattctgaagattcaacagcagaatct
tccagtagtactagagaaagggatgggggtgtagtgcctacatggtctccctcaagtagt
aactattcggaccaatatgttggtgatgataatggtattgggaccagttcatcttacttg
caaaggcatccacaatctcaccagctaatgaactggcagcggctttctcaaacagggtga
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