Solanum lycopersicum (tomato): 544292
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Entry
544292 CDS
T02665
Symbol
UBC27
Name
(RefSeq) ubiquitin conjugating enzyme
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
544292 (UBC27)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
544292 (UBC27)
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
544292 (UBC27)
Ubiquitin system [BR:
sly04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
544292 (UBC27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UBA
DUF1421
UBA_7
UEV
RWD
UBA_4
Motif
Other DBs
NCBI-GeneID:
544292
NCBI-ProteinID:
NP_001233964
UniProt:
Q43780
LinkDB
All DBs
Position
6:47243614..47247748
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AA seq
194 aa
AA seq
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MVDLARVQKELHECNRDVQVSGINVTLKGDSLTHLIGTIPGPVGTPYEGGTFKIDITLTD
GYPFEPPKMKFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSIQALLSAPEPDD
PQDAVVAQQYLREHQTFVGTARYWTETFAKTSTLAADDKIQKLVEMGFPEAQVRSTLEAN
GWDENMALEKLLSS
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttggctagggttcaaaaggagctccatgaatgcaacagagatgttcaggtt
tctggaattaatgttacccttaaaggtgacagtctcactcacttgattggtacaatccct
ggtcctgttggtactccttacgaaggcggtactttcaagatcgatatcactcttactgat
ggctacccatttgagcctccaaaaatgaaattcgccacaaaagtttggcatcccaacata
agtagtcaaagtggagcaatatgcctagacatcctgaaggaccagtggagcccagcacta
actctcaagacagctctcctttctatacaagcattactttctgctcctgaacctgatgat
ccacaagatgcagttgttgcacagcagtatcttagagaacatcagacctttgtcggcaca
gctcgttactggactgagacttttgcaaaaacatccacacttgctgcagacgacaagata
caaaagcttgtggaaatgggctttcctgaagctcaagtgaggagtactttggaagcaaat
ggttgggatgaaaacatggctcttgaaaagctgttgtccagctaa
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