Solanum lycopersicum (tomato): 778227
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Entry
778227 CDS
T02665
Symbol
TUB
Name
(RefSeq) beta-tubulin
KO
K07375
tubulin beta
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04145
Phagosome
sly04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
778227 (TUB)
09142 Cell motility
04814 Motor proteins
778227 (TUB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
778227 (TUB)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sly04812
]
778227 (TUB)
04147 Exosome [BR:
sly04147
]
778227 (TUB)
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
778227 (TUB)
Cytoskeleton proteins [BR:
sly04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
778227 (TUB)
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
778227 (TUB)
Exosomal proteins of colorectal cancer cells
778227 (TUB)
Exosomal proteins of bladder cancer cells
778227 (TUB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
778227
NCBI-ProteinID:
NP_001234807
UniProt:
Q38MV0
LinkDB
All DBs
Position
4:complement(67325369..67328016)
Genome browser
AA seq
451 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGG
RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL
DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSD
TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT
CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAK
NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
PTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
LVAEYQQYQDATADDEEEYDDDEVADDQYQS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaattcttcacattcaaggaggacaatgtggaaaccaaatcggttccaaattc
tgggaagttatctgtgatgaacacggtgttgatcctaccggacgttacaaaggaaccgcc
gctgagtccgatcttcagcttgaacgtatcaatgtttatttcaatgaagcttctggtgga
cgttatgttcctagggcggttttgatggatctagagcctggtacgatggatagtatcaga
tctggtccctatggacagatcttccgtcctgataactttgtctttggacagtctggtgct
ggtaataactgggccaaaggtcattatactgaaggcgctgagttgattgatgctgttcta
gatgttgttcgtaaagaagcggagaattgtgattgcttgcaaggattccaggtttgccac
tcacttggtggagggactggatctggcatgggaacactactgatttccaaggtaagggag
gagtatccagacaggatgatgctcacattctctgttttcccttctccaaaggtgtctgac
actgttgtagaaccatacaatgctacactgtcggtgcaccaattggtggagaatgccgat
gaatgtatggtccttgacaacgaagctctatatgatatttgtttcagaactttgaagctc
actactccaagttttggtgacttgaaccatttgatctctgcaaccatgagtggtgttact
tgctgtttgagattccctggtcagctgaactcagacctgaggaaattggctgtgaattta
attcccttcccacgtcttcacttcttcatggtgggatttgccccactaacctctcgtgga
tcacagcaatacatatcgctaacagtgccagagcttactcaacaaatgtgggatgccaag
aacatgatgtgcgcggcagatccccgtcatggacgttacctgacagcttctgccatgttt
aggggtaagatgagcacaaaggaggtagatgaacagatgatcaatgtgcagaacaagaac
tcgtcctactttgttgaatggatccctaacaatgtcaagtctagtgtgtgtgatatccca
ccaactgggctgaagatggcatccacgtttgttggaaattcaacctccattcaggagatg
tttagaagggtgagtgagcagtttactgccatgttcaggcgcaaggctttcttgcattgg
tacacaggtgaaggaatggatgaaatggagttcactgaagccgagagcaacatgaatgat
ttggttgcagaatatcaacaataccaggatgctacagcagatgatgaggaagagtatgat
gatgatgaggttgctgatgatcaataccaatcctaa
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