KEGG   Solanum lycopersicum (tomato): 778227
Entry
778227            CDS       T02665                                 
Symbol
TUB
Name
(RefSeq) beta-tubulin
  KO
K07375  tubulin beta
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04145  Phagosome
sly04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    778227 (TUB)
  09142 Cell motility
   04814 Motor proteins
    778227 (TUB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sly03036]
    778227 (TUB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sly04812]
    778227 (TUB)
   04147 Exosome [BR:sly04147]
    778227 (TUB)
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     778227 (TUB)
Cytoskeleton proteins [BR:sly04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    778227 (TUB)
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   778227 (TUB)
  Exosomal proteins of colorectal cancer cells
   778227 (TUB)
  Exosomal proteins of bladder cancer cells
   778227 (TUB)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 778227
NCBI-ProteinID: NP_001234807
UniProt: Q38MV0
LinkDB
Position
4:complement(67325369..67328016)
AA seq 451 aa
MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGG
RYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL
DVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSD
TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT
CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAK
NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP
PTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
LVAEYQQYQDATADDEEEYDDDEVADDQYQS
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagaaattcttcacattcaaggaggacaatgtggaaaccaaatcggttccaaattc
tgggaagttatctgtgatgaacacggtgttgatcctaccggacgttacaaaggaaccgcc
gctgagtccgatcttcagcttgaacgtatcaatgtttatttcaatgaagcttctggtgga
cgttatgttcctagggcggttttgatggatctagagcctggtacgatggatagtatcaga
tctggtccctatggacagatcttccgtcctgataactttgtctttggacagtctggtgct
ggtaataactgggccaaaggtcattatactgaaggcgctgagttgattgatgctgttcta
gatgttgttcgtaaagaagcggagaattgtgattgcttgcaaggattccaggtttgccac
tcacttggtggagggactggatctggcatgggaacactactgatttccaaggtaagggag
gagtatccagacaggatgatgctcacattctctgttttcccttctccaaaggtgtctgac
actgttgtagaaccatacaatgctacactgtcggtgcaccaattggtggagaatgccgat
gaatgtatggtccttgacaacgaagctctatatgatatttgtttcagaactttgaagctc
actactccaagttttggtgacttgaaccatttgatctctgcaaccatgagtggtgttact
tgctgtttgagattccctggtcagctgaactcagacctgaggaaattggctgtgaattta
attcccttcccacgtcttcacttcttcatggtgggatttgccccactaacctctcgtgga
tcacagcaatacatatcgctaacagtgccagagcttactcaacaaatgtgggatgccaag
aacatgatgtgcgcggcagatccccgtcatggacgttacctgacagcttctgccatgttt
aggggtaagatgagcacaaaggaggtagatgaacagatgatcaatgtgcagaacaagaac
tcgtcctactttgttgaatggatccctaacaatgtcaagtctagtgtgtgtgatatccca
ccaactgggctgaagatggcatccacgtttgttggaaattcaacctccattcaggagatg
tttagaagggtgagtgagcagtttactgccatgttcaggcgcaaggctttcttgcattgg
tacacaggtgaaggaatggatgaaatggagttcactgaagccgagagcaacatgaatgat
ttggttgcagaatatcaacaataccaggatgctacagcagatgatgaggaagagtatgat
gatgatgaggttgctgatgatcaataccaatcctaa

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