Solanum lycopersicum (tomato): 778234
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Entry
778234 CDS
T02665
Symbol
EBF1
Name
(RefSeq) EIN3-binding F-box protein 1
KO
K14515
EIN3-binding F-box protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04016
MAPK signaling pathway - plant
sly04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
778234 (EBF1)
04075 Plant hormone signal transduction
778234 (EBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
778234 (EBF1)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
778234 (EBF1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_FBXL15
LRR_SKP2
LRR_6
LRR_4
F-box-like
F-box
LRR_16
LRR_At1g61320_AtMIF1
LRR_RPS2
LRR_EndoS
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
778234
NCBI-ProteinID:
NP_001234858
UniProt:
Q2PQJ1
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All DBs
Position
12:3236486..3240228
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AA seq
637 aa
AA seq
DB search
MPTLVNYSGDDEFYSGGSFCSADLGLMLSLGHADVYCPPRKRARISGPFVVEDRSKDPSL
EVLPDECLFEILRRLPGGRERGAAACVSKRWLTVLSSVKNSEICRSKSYNNLNDAIMISK
DEDLEVECDGYLTRCVEGKKATDIRLAAIAVGTSTRGGLGKLSIRGSNSVRGITNVGLSA
VAHGCPSLRVLSLWNVPSIGDEGLLEVARECHSLEKLDLSHCRSISNKGLVAIAENCPSL
TSLTIESCPNIGNEGLQAVGKYCTKLQSLTIKDCPLVGDQGVASLLSSGASMLTKVKLHG
LNITDFSLAVIGHYGKLITSLNLCSLRNVSQKGFWVMGNAQGLQSLVSLTITLCQGATDV
GLEAVGKGCPNLKYMCIRKCCFVSDGGLVAFAKEAGSLESLILEECNRITQVGILNAVSN
CRKLKSLSLVKCMGIKDLALQTSMLSPCESLRSLSIRSCPGFGSSSLAMVGKLCPKLHQL
DLSGLCGITDAGLLPLLENCEGLVKVNLSDCLNLTDQVVLSLAMRHGETLELLNLDGCRK
VTDASLVAIADYCPLLIDLDVSKSAITDSGVAALSRGVQVNLQVLSLSGCSMVSNKSVLS
LKKLGENLLGLNLQHCSVSCSSVELLVEALWRCDILS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcttgttaattacagtggtgatgatgagttctactctggtggatcgttttgt
tctgcagatttgggtctcatgttgtctttgggtcatgctgatgtttactgtcctcctagg
aagagggctagaattagtggcccgtttgttgtcgaagaccgatcaaaggatccatctctt
gaggttcttcctgatgaatgcctatttgagatcctcagacgattgcctggaggccgagaa
aggggtgcagcagcttgtgtttctaagcgctggcttacagtgttgagtagcgtgaaaaac
tctgaaatttgcaggagcaagagctataacaatctaaatgacgctataatgatctctaaa
gatgaagatcttgaagttgaatgtgatggataccttaccaggtgtgtggaagggaagaaa
gctactgatattagacttgctgcaattgcagttgggacgtctacccgtggtggactagga
aagctttctattcgagggagtaactcagttcgtggtattactaatgtcggtctatctgct
gttgcacatgggtgtccttctcttagggtcctatcattgtggaatgttccttctatcgga
gatgaaggtctcttggaggttgcaagagaatgccattcattagaaaagctagatctgagc
cactgtcgttcaatctccaacaagggtcttgttgcaatagcagagaattgccctagcttg
acttcattgactattgaatcctgtccaaatattggaaacgaaggcttgcaagctgttgga
aaatactgcaccaaactacagtctcttacaattaaggactgcccgcttgtcggagatcag
ggagttgctagtcttctgtcatcaggtgcttcaatgttaacaaaagtgaaactacatggt
ctaaacattaccgatttctcgcttgctgtcattggtcactacggcaagctgattaccagt
cttaatctttgttcacttcgtaatgtgagtcagaagggattttgggtcatgggtaatgct
caaggcctccagtctttggtttctttgacaatcaccttatgccagggagccactgatgtc
ggtcttgaagctgtgggaaagggatgcccaaatctcaaatatatgtgcattcgcaagtgt
tgctttgtttctgacggtggtcttgttgctttcgctaaagaggctggatctctcgagagt
ttaatcttggaggagtgcaacagaattacccaagtaggtatccttaatgcagtttcaaac
tgcaggaagttaaagtctctttccctagtgaagtgcatgggaatcaaggatctagctcta
caaacttccatgctgtctccatgtgaatctcttcggtccttgtctatccgaagctgtcca
ggattcgggagcagtagcttagctatggttggtaagctctgccccaagctgcatcaatta
gatctcagtgggctttgtggaataaccgatgctggtcttctcccactcttggagaactgt
gaaggacttgttaaggtgaaccttagcgactgcctgaacttgacagaccaagtggtgctt
tcattggctatgcgacatggcgagacccttgaattgttgaatctcgacggatgcaggaag
gttaccgatgcaagtttagtggcaattgcagattattgcccattacttattgatcttgat
gtttctaagagtgcaataactgattctggtgtagctgctttatcccgtggagtgcaagtg
aatttgcaggtcctttccttatcaggttgctccatggtatcgaacaagagtgtcctttct
cttaaaaagttaggagagaatctactcggcttgaatctccagcattgctccgttagttgc
agctcagtcgagcttcttgtggaggctttgtggaggtgtgacatcctctcctaa
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